Candidatus Brocadia sp. Ega_18-Q3-R5-49_MAXAC.112v2: IPI25_00850
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Entry
IPI25_00850 CDS
T07026
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
broc
Candidatus Brocadia sp. Ega_18-Q3-R5-49_MAXAC.112v2
Pathway
broc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
broc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IPI25_00850 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
broc03400
]
IPI25_00850 (uvrB)
DNA repair and recombination proteins [BR:
broc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IPI25_00850 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IPI25_00850 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UvrD-helicase
Kinesin
AAA_22
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
QQR66846
LinkDB
All DBs
Position
185615..187579
Genome browser
AA seq
654 aa
AA seq
DB search
MSIFKLVSPFTPQGDQPKAIQQLVEGYQKGTMYQTLLGVTGSGKTFTMANVIAALEKPTL
VMTHNKTLAAQLYSEFKSFFPENAVGYFVSYYDYYQPEAYIPQRDIYIEKEATINQEIDR
LRLAATSNLMSRKDVIIVASVSCIYGLGSPEEYQEMYVHLVKGDSIERNKFLRSLIDIQY
ERNDIQFIRGTLRVRGDVVEVFPAYEEFAYRIEFFGDEVDRISIINPTTGNTVQEVKEIA
VYPAKHFVMPEGKIKGVVRSIEDELNDRLKELRSKEKLLEAQRLEARTRYDMEMLLEVGY
CHGIENYSRHLSARAPGETPYTLFDYFPKEFFLIVDESHVSVPQIAGMYHGDRARKETLV
NYGFRLPSALDNRPLRFDEWEKRIHQIMLVSATPGHYELEKSKGSVAEQIIRPTGLVDPI
IYVKPAKTQVGDLLKQIKKRAQRRERVLVTTLTKRLAEDLSEYIQEEGLKGMYLHSEIDA
IERVTILRDLRMGKFDVLVGVNLLREGLDLPEVSLVAILDADKEGFLRSETSLIQTIGRT
ARNVNAEVILYADEITNSMKRAMDETNRRRELQLAYNKKHNITPKTIQKEIKKGINDEIS
SHKLVYETVAESEEEYITQEFVNELEEEMLRAAEALEFERAAELRDKIQRIRSK
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatttttaaattagtatctccttttacaccacagggcgaccagccaaaggcaata
caacaactcgtagaaggttatcaaaaaggcaccatgtatcaaaccttgttgggagttact
ggttccggaaagacctttaccatggcaaacgtgattgctgccctggaaaagccaacgctg
gtgatgactcacaataaaaccctggcagcccagctttatagtgaatttaaaagcttcttt
ccggaaaacgctgtagggtattttgtcagttattacgactattatcaacccgaggcatat
atcccgcaacgggatatctacattgaaaaggaagcaacgatcaatcaggagattgaccgc
ctgcgcctggctgctaccagtaatctcatgtcacggaaggatgttatcattgtcgccagc
gtttcctgcatctatggattgggctcgcccgaggagtatcaggaaatgtatgtacatctg
gtcaagggtgattcgatagaaagaaacaaattcctgaggagtctcattgatatccagtat
gaacgaaatgatatacagttcattcgcggcacgttacgggtgcggggagatgttgtggag
gtatttcctgcctacgaggagtttgcttatcgcatagaattttttggtgacgaagtcgac
aggatttccataattaatcccacaacggggaatacggtgcaggaggtgaaggaaatagct
gtttacccggcaaaacactttgttatgccggaaggaaagatcaaaggagtcgtcaggtct
atcgaagacgaactgaatgatcggttaaaagaacttcgttcaaaagaaaagctgctcgag
gctcagcgcctggaggcccggacgcgctacgacatggagatgcttctggaggtagggtat
tgtcacggtattgaaaattattcgaggcacctcagcgcccgtgcgcccggcgaaacacca
tacaccctgttcgattactttcctaaagaatttttccttatcgttgacgagtcgcatgtc
tctgtcccgcagattgccggtatgtaccatggcgaccgggcgcgcaaggagacgcttgtc
aactatggtttccgcctgccttcagcgcttgataatcgccccttgcggtttgatgaatgg
gaaaagaggatccatcagatcatgcttgtttcggcaacgcctggccactatgagctagag
aaaagcaaaggcagtgtggccgaacagattattcgtccaaccggtcttgtcgatccgata
atctatgtgaaacctgccaaaactcaggtaggggacctcctgaaacaaattaagaaacgg
gcacagaggagggaacgggtgctggtaacgacgttgacgaaacgtcttgccgaagacctg
agcgaatatatccaggaagaaggactcaaaggtatgtatcttcactcggaaatagacgcg
atagaaagggtaaccatattgcgtgatttgaggatgggaaaatttgatgtgctggtgggt
gttaatctcctcagggaagggctggatttaccggaagtttctctcgtagcaattcttgat
gccgacaaagaaggatttctgcgttccgaaacttccctgatacagactatcggccgaaca
gcaaggaacgtaaatgccgaggttatcttatatgccgatgagataacaaattccatgaaa
cgtgctatggatgaaaccaacaggcgacgggaacttcaactggcttacaacaaaaaacat
aatattaccccaaaaaccatacaaaaagagatcaaaaaaggcatcaatgatgagatttca
tcgcataaacttgtgtacgaaaccgttgcagaaagcgaagaggaatacattactcaggag
tttgtaaacgaactggaggaggagatgctcagggcagcggaggcattggagtttgagcgt
gcggctgagcttcgggataagattcaacgaatccgatcgaaatag
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