Candidatus Brocadia sp. Ega_18-Q3-R5-49_MAXAC.112v2: IPI25_01890
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Entry
IPI25_01890 CDS
T07026
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
broc
Candidatus Brocadia sp. Ega_18-Q3-R5-49_MAXAC.112v2
Brite
KEGG Orthology (KO) [BR:
broc00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
IPI25_01890 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
broc03019
]
IPI25_01890 (rnc)
03009 Ribosome biogenesis [BR:
broc03009
]
IPI25_01890 (rnc)
03036 Chromosome and associated proteins [BR:
broc03036
]
IPI25_01890 (rnc)
Enzymes [BR:
broc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
IPI25_01890 (rnc)
Messenger RNA biogenesis [BR:
broc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
IPI25_01890 (rnc)
Ribosome biogenesis [BR:
broc03009
]
Eukaryotic type
90S particles
RNase
IPI25_01890 (rnc)
Prokaryotic type
rRNA processing factors
IPI25_01890 (rnc)
Chromosome and associated proteins [BR:
broc03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
IPI25_01890 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
QQR67024
LinkDB
All DBs
Position
complement(407757..408419)
Genome browser
AA seq
220 aa
AA seq
DB search
MLEKALTHTSCKLENNFSNERLEFLGDAVLGMIISDYLYKTLPQHSEGELTKIKSVVVSQ
TTLAKVSLEAQLKNFLNVGRGLHDRNFLPKSLLANVFEAVIAAIYLDGGLEPAYNFTMKY
LKKEIDIVCKNQHEKNYKSILQQHSQKEHGVTPVYRVLQQVGPDHGKLFEVSVLIKGNEY
GRGWGKNKKEAEQFAAKETLKMIIPDMTYEIHEINNKACN
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
gtgcttgaaaaggcgcttacccatacttcttgcaaattggaaaataatttttccaatgaa
cggttagaatttttgggtgatgccgtattgggaatgattatttctgactatctttacaag
accctgcctcaacatagcgagggagaattaacaaaaataaaatctgtggtagttagtcaa
acaacacttgccaaagttagcctggaagcacagttaaaaaattttctcaacgtggggaga
gggttgcacgatcggaattttcttccaaaatctctacttgcgaatgtatttgaagctgtt
attgctgcaatctatcttgacggcggtcttgagccagcatataattttacaatgaagtat
cttaaaaaagagattgacattgtttgtaaaaatcaacatgaaaaaaattacaaatctatc
ctgcaacaacatagccagaaagagcatggcgttacgccagtctaccgagtattgcagcaa
gttggaccagatcacgggaaattatttgaagtgagtgtgttaataaaaggcaatgaatat
ggcagaggatggggtaaaaacaaaaaagaggccgaacaattcgcagcaaaagagaccttg
aaaatgatcatccccgatatgacttatgaaattcatgaaataaataataaagcttgcaat
taa
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