Candidatus Brocadia sp. Ega_18-Q3-R5-49_MAXAC.112v2: IPI25_02325
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Entry
IPI25_02325 CDS
T07026
Name
(GenBank) shikimate dehydrogenase
KO
K13832
3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:
4.2.1.10
1.1.1.25
]
Organism
broc
Candidatus Brocadia sp. Ega_18-Q3-R5-49_MAXAC.112v2
Pathway
broc00400
Phenylalanine, tyrosine and tryptophan biosynthesis
broc00999
Biosynthesis of various plant secondary metabolites
broc01100
Metabolic pathways
broc01110
Biosynthesis of secondary metabolites
broc01230
Biosynthesis of amino acids
Module
broc_M00022
Shikimate pathway, phosphoenolpyruvate + erythrose-4P => chorismate
Brite
KEGG Orthology (KO) [BR:
broc00001
]
09100 Metabolism
09105 Amino acid metabolism
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
IPI25_02325
09110 Biosynthesis of other secondary metabolites
00999 Biosynthesis of various plant secondary metabolites
IPI25_02325
Enzymes [BR:
broc01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.25 shikimate dehydrogenase (NADP+)
IPI25_02325
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.10 3-dehydroquinate dehydratase
IPI25_02325
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Gene cluster
GFIT
Motif
Pfam:
DHquinase_I
Shikimate_dh_N
SDH_C
Shikimate_DH
F420_oxidored
KARI_N
2-Hacid_dh_C
NAD_binding_7
Sacchrp_dh_NADP
Pyr_redox_3
ApbA
NAD_Gly3P_dh_N
TrkA_N
Pyr_redox_2
Motif
Other DBs
NCBI-ProteinID:
QQR67095
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Position
complement(493215..494711)
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AA seq
498 aa
AA seq
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MICIPIIANNLDDALRDMAEASKFADIIEVRLDYIKNPDLKRILERRTKPLIITNRPDRE
GGKFNGSEEERIAVLKHAIQLQADFVDIEHDSIHNLCRDTGLHVPSSKTKLIVSYHNFRE
TPDDLISLYQRLSQSDADTVKIVTHANSITDNIKIYRLLQQARRPLISFCMGEYGIISRI
LYKRFGSYLTFASLRKGKESAPGQITIQEFLLTYQAQRQEKDTGIYGLIGNPVSHSISPM
IHNTLFKEMNFNSIYVPFKVDNIDDFFRSFRELDVKGYSVTIPHKESVIHHLDAIDPVAK
KIGAVNTIVNKDSKFIGYNTDCKAAIQALEDIHQVSGMDTKNDHLKDKRITLLGAGGTAR
AIAFGLQDRGAQVTIVSRNYERAQSLSRDVGCSSKELKDLQKIETDILINATPVGMLPAV
NETPIDKKLLKPSTIVFDTIYNPIETRLLREAKAQGCKIVGGLPMFVNQAAAQFELWTGM
KPSRALIEDIAYKKLLGE
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgatctgtatacccatcattgcaaacaaccttgatgacgctctccgggacatggcagag
gcatcgaaatttgcggatatcatcgaagtgcgcctcgattacataaaaaatccagacctg
aaacgcattctggaaagacgaacaaaacccctcattatcacaaaccgccctgatcgcgaa
ggcggcaagtttaatggaagtgaagaagagaggatcgctgtcctgaaacatgcaatccag
ctccaggctgatttcgtcgatatcgagcacgacagcattcataatttatgcagggacacg
gggctccatgtcccttcaagcaaaacaaaacttattgtatcctaccataatttccgtgag
acacctgatgacttgatttccctgtaccaaagactcagccaaagtgatgcagacaccgta
aaaatagttacccacgcaaattcaatcacggataacatcaaaatctaccgactactccaa
caagcacgacgacctttaatctcattttgtatgggtgagtacggtataatcagccgtatt
ctctataaaaggtttggcagttatctgacctttgcctcacttcggaaagggaaggaatct
gccccaggccaaatcaccattcaggaatttttacttacctatcaggcacagagacaagag
aaagatacgggaatctatggactgattggaaatcccgtctctcatagcatcagcccaatg
attcataataccctcttcaaggaaatgaacttcaatagtatctatgttccttttaaggta
gacaacatcgatgattttttcagatcgtttagggaattggacgtaaagggttacagcgta
acaattccgcataaagagtcggtaatacatcacctggatgcaatagaccccgtggcaaag
aagatcggtgcagtaaataccattgttaataaagatagcaagttcattggttataacaca
gactgtaaggcggccatccaggcattggaagacattcatcaagtatctggaatggacacg
aagaatgaccatctaaaagacaaacgcatcacgttgttaggggctggtggcactgcccgc
gccatcgcattcggattacaggatcgcggtgcacaggtaacaattgtaagcaggaattac
gaacgggcgcaatcactgtccagagacgttggctgctcatcaaaggaactcaaagattta
cagaagattgaaacggacatcctgatcaatgccacccctgtaggcatgttacccgcggtt
aatgaaactcccattgacaagaagctactaaaacccagcacgatcgtctttgacactatt
tataatcctatagagacgagactgttgcgtgaagccaaagcgcagggctgtaagatcgtc
ggtggcctgccgatgtttgtaaaccaggcggcagcacaattcgaactgtggactggcatg
aaaccttcacgcgccttaattgaagatattgcttataaaaaacttctcggagagtga
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