Candidatus Brocadia sp. Ega_18-Q3-R5-49_MAXAC.112v2: IPI25_04365
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Entry
IPI25_04365 CDS
T07026
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
broc
Candidatus Brocadia sp. Ega_18-Q3-R5-49_MAXAC.112v2
Pathway
broc00521
Streptomycin biosynthesis
broc00523
Polyketide sugar unit biosynthesis
broc00525
Acarbose and validamycin biosynthesis
broc00541
Biosynthesis of various nucleotide sugars
broc01100
Metabolic pathways
broc01110
Biosynthesis of secondary metabolites
broc01250
Biosynthesis of nucleotide sugars
Module
broc_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
broc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
IPI25_04365 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
IPI25_04365 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
IPI25_04365 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
IPI25_04365 (rfbB)
00525 Acarbose and validamycin biosynthesis
IPI25_04365 (rfbB)
Enzymes [BR:
broc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
IPI25_04365 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
adh_short_C2
Motif
Other DBs
NCBI-ProteinID:
QQR68071
LinkDB
All DBs
Position
929176..930207
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AA seq
343 aa
AA seq
DB search
MAILITGGAGFIGSHYVRRMIHQGRRVVVLDKLTYAGNLENLKDILDDSKMSQQFKFYKG
DICNQELVEHIFSEEAIDNLVNFAAESHVDRSISSADNFIDTDMKGVFVLLEASRRFSLK
KFIQISTDEVYGTAHHGAFKETDALNPSNPYAASKAGGDRLAYAYWVTYKLPIIITRASN
NYGPNQHPEKFIPLFITNALEDKALPLYGDGRQVRDWIHVEDHCAGIDFLMNHGKDGEVY
NIGGGNERYNIDTAHLILDELGKPHSLLEHVKDREGHDRRYALDCSKLKSLGWKAEIKFE
KGLKDTIQWYENNRAWWMRIKSGEFMEYYYKQYKHRFASTVLS
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atggcaatccttatcactggtggtgcggggtttatcggaagtcactacgtccgtcgaatg
attcatcagggcagacgggtggtggtgctggataaattgacctatgcgggaaatctagaa
aatctgaaagatatacttgatgattcaaagatgtctcagcagtttaaattttacaaaggt
gacatttgtaatcaggagttggtggaacatatcttctcagaggaagctattgacaatctt
gtcaacttcgccgcagaatcgcacgttgatcgaagtattagcagtgcagacaacttcatt
gatacggatatgaagggtgtctttgtcctgcttgaggcatcgagacgttttagtttaaaa
aagtttattcaaatatccaccgacgaggtttatggaacggctcatcacggcgcattcaag
gagacggacgccttaaatcccagcaatccgtatgctgcaagtaaagcagggggagaccgg
cttgcttatgcttactgggtgacctataagttgccgatcattattaccagggcctctaac
aactacggacccaatcaacatccggaaaaatttatccccctttttattaccaatgcctta
gaggataaagcgcttcctctctatggcgatggaaggcaggtaagggattggattcatgtt
gaagaccattgtgcaggtattgattttcttatgaatcacgggaaggatggcgaggtatat
aatatcgggggaggaaatgaacgatataatatcgatacggctcatctcattttagatgaa
ctcggcaaacctcactctctgctggagcacgtaaaagacagagaagggcacgacaggcgc
tacgccctggattgtagcaagctaaaatctttggggtggaaagcagagataaaatttgaa
aaaggcctgaaagatacgatacaatggtatgaaaataatcgggcgtggtggatgcggata
aaaagcggtgaattcatggagtattactacaagcaatataaacaccggtttgcaagcact
gtgctatcatag
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