Candidatus Brocadia sp. Ega_18-Q3-R5-49_MAXAC.112v2: IPI25_04390
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Entry
IPI25_04390 CDS
T07026
Name
(GenBank) CCA tRNA nucleotidyltransferase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
broc
Candidatus Brocadia sp. Ega_18-Q3-R5-49_MAXAC.112v2
Pathway
broc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
broc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IPI25_04390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
broc03019
]
IPI25_04390
Enzymes [BR:
broc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
IPI25_04390
Messenger RNA biogenesis [BR:
broc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
IPI25_04390
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
HD
Motif
Other DBs
NCBI-ProteinID:
QQR67462
LinkDB
All DBs
Position
complement(932642..933988)
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AA seq
448 aa
AA seq
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MTAKQNAIEIVKTLQKHGYKAFLAGGCVRDMIMGKESSDYDIATNALPQNVTKLFEKTIP
VGVQFGVVVVVKNNHNFEVATFRTEGSYSDGRHPDYVTFCTPEDDVKRRDFTINGLLCNP
IKNEILDYVGGRDDISRGIIRTIGDPIKRFTEDKLRMIRAVRFACRFHFPIHRDTQQAII
QLAPQIHVVSAERIREELEKILTGPDPHVGIKLLDELHLLQEILPEISQMKGVRQPENFH
PEGDVFVHTLLCLSKLEPLVDQEMKKRSFTLAMGVLLHDIGKTVTFKESDRIRFNLHEKV
GADMAAKICDRLKLSNVEKERIVWLVLKHLCFKDAQKMRMNKLKRLFANEGYQELAELCR
IDALASSGNLSDYHFCQEMFNKLSHEEIKPKPLITGHDLIAMGLKPGPSFKTILTKIEDE
QLDGSITNKETALEEVKTLISQMTTVLK
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgactgctaaacagaatgccatagagatcgtaaaaactctgcaaaagcacggttataaa
gccttccttgcgggtggttgtgtacgcgatatgatcatgggaaaggagtcctccgattat
gatattgccaccaatgccttaccccagaatgttacaaaactctttgaaaaaaccattcct
gtcggcgtacagttcggtgtggtcgtagttgtcaaaaacaatcacaatttcgaggtagcc
accttccgcacagaaggctcatacagcgacggccgccaccccgattatgtaaccttttgc
actcccgaggatgacgtaaaacgaagagatttcaccatcaatggactgctctgcaatcct
attaagaatgagatacttgattatgtcggtggaagagacgatatttctcgagggattatc
cgaacgatcggagatcctattaaacgcttcactgaagataaactgcgtatgatacgggcg
gtacgttttgcatgtcgctttcattttcccatacatcgtgatacacagcaggccattatt
cagcttgcaccccaaattcatgttgtcagtgccgaacgcatccgtgaagaactggagaaa
atacttactggtcccgatccacatgtgggtatcaaactgttggatgaactccatctcttg
caagagatcctgccggagatatcccaaatgaaaggggtgcgacagccggaaaactttcat
cctgaaggagacgtctttgtgcatacccttctgtgcctttccaaactggaacctcttgtg
gatcaggagatgaaaaaacgttcttttaccctggcaatgggggtactcttacacgacatt
ggcaagaccgttacctttaaggagtctgaccggatcaggtttaatctgcatgaaaaagta
ggtgcagatatggcggcaaagatctgtgatcggttgaagttgtcgaacgttgaaaaagag
cgcatagtctggcttgttttgaaacacctctgttttaaggatgcacaaaagatgcgcatg
aacaaactcaaacgactgtttgcaaacgaaggatatcaggagctggcagagttatgcagg
atcgacgcccttgcaagcagcggtaatctgtctgactatcacttctgtcaggaaatgttc
aacaagttgagccacgaagagatcaaaccaaaacccctgattaccggtcatgacctcata
gccatggggttaaaacccggtccttcgtttaagaccattttgacgaaaattgaggacgaa
cagctcgacggtagcatcacaaataaggagacagctctcgaagaagtaaagactcttatt
tcacaaatgactaccgttctcaaataa
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