Candidatus Brocadia sp. Ega_18-Q3-R5-49_MAXAC.112v2: IPI25_04850
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Entry
IPI25_04850 CDS
T07026
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
broc
Candidatus Brocadia sp. Ega_18-Q3-R5-49_MAXAC.112v2
Pathway
broc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
broc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
IPI25_04850
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
broc02000
]
IPI25_04850
Transporters [BR:
broc02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
IPI25_04850
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE
SMC_N
TOBE_2
AAA_29
DUF4436
AAA_23
Motif
Other DBs
NCBI-ProteinID:
QQR67538
LinkDB
All DBs
Position
complement(1038668..1039747)
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AA seq
359 aa
AA seq
DB search
MHKLQLIDISKSFGSQTVLKNLSLEIFPNELFIILGSSGGGKTTLLLGIIGLQPFDSGRV
IIDGVDVTNLSPGERNIGYVPQNYALFPNYTVFENIAFGLRLRNTPKGIIQTKVRQIIDN
FSLHGLEYHFPSQLSGGQMQRVALARALIIEPSLLLLDEPVSALDIETRQKIKAELKEVQ
KKLHVTMVYITHDQQETLEMADRFGILNEGKIEQYGSPYEVFYKPASLFVARFLNTENIL
EGKVIHKFGNKVTIQINDIILKMSTTLELPEGKQVTVCIRPGAIHLSTHPAHPGKNVFTG
TIESIHPIGRDLEVKVLVTPQETLKTRISRTAVKKLKLTHGMPVNLFIDEAYVHLIPVP
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgcataaattacaactgatagacatatcaaaatcctttggttcacaaactgtcttaaaa
aatttatcattggaaatctttcctaatgagctatttatcatccttggcagcagcggaggc
gggaagacaaccctgctccttggcattattggcctgcagccatttgatagtggccgggta
attatagacggtgtagacgtcacaaaccttagccccggagagcggaatatcggatatgta
ccgcaaaattatgccctttttcccaattacacggtctttgaaaatatcgcttttggattg
cgactgcgtaataccccgaaaggcattattcagacgaaggttagacaaattattgataat
tttagtttgcatgggctcgaatatcatttcccatcccaactcagtggaggacagatgcaa
cgggtagctttagccagggctttgattattgaaccatcgcttttgttattggacgagccc
gtaagcgccctggatatagaaacacgacaaaaaattaaggcagagcttaaagaagttcaa
aagaaattacacgtcacgatggtttatattacgcatgatcagcaggaaacacttgaaatg
gcagatcgttttgggattctcaacgaaggtaagatagagcaatacggcagcccgtatgag
gtattctataaaccggcatccctctttgttgctcgttttttgaataccgagaatatattg
gaaggaaaggtcatccataagtttggaaataaagtaactattcagataaatgacattatt
ttgaaaatgtccaccactctggaattaccggaaggaaagcaggtaacggtatgcattcgc
cccggcgctatacaccttagcacccatcccgcacaccctggcaaaaatgtttttaccgga
acgatagaatcgatccatcctattggacgggatcttgaagtaaaggtgctagttacccca
caggaaacgcttaaaacacgcataagccgaaccgccgtcaagaagctgaaactcacgcat
ggaatgccggtcaacctcttcatcgatgaggcttatgtacatttaattcctgtcccatga
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