KEGG   Candidatus Brocadia sp. Ega_18-Q3-R5-49_MAXAC.112v2: IPI25_05630
Entry
IPI25_05630       CDS       T07026                                 
Name
(GenBank) CRISPR-associated helicase/endonuclease Cas3
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
broc  Candidatus Brocadia sp. Ega_18-Q3-R5-49_MAXAC.112v2
Brite
KEGG Orthology (KO) [BR:broc00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:broc02048]
    IPI25_05630
Enzymes [BR:broc01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     IPI25_05630
Prokaryotic defense system [BR:broc02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    IPI25_05630
SSDB
Motif
Pfam: Cas3-like_C_2 DEAD Helicase_C ResIII HD nSTAND_NTPase5 AAA_14 Trimer_CC SBP_bac_8
Other DBs
NCBI-ProteinID: QQR67682
LinkDB
Position
1192845..1195070
AA seq 741 aa
MNSKEPLAHSAKPEKGIPPQTYAKHIAGVMKRVADNVSAMTQYFSGNVQFLQEMVKRAAL
LHDLGKLDEANQAVLKKGGKGHLPLNHVDAGTACLSKGKECEAALFVYGHHIGLCSVPYE
SGRGVQFLRDDKISEEVDQKLADYLADHEEWCGKVEKSSDRIVKSAWTSLTRRLAFSCLV
DADYGDTAAHYDGETVKQVVSRRWEERLEKLKEYVQGLQNKSDASEERKIQRQNTFKACR
DADTQPSLYSCDSPVGTGKTTAVMAHLLCAAIDKELRHIFVVLPYTNIIKQSVDVYRKAL
VLPGENPEEVVAEHHHQADFSSYELRQYASLWTAPITVTTAVQFFETLGANHPAQLRKLH
ELPGSAVFLDEAHAAIPTWHWPQAWRWLKDLRDNWHCHFVFASGSLPQFWQNEKITKPAE
DVPNLLGIKQRMQVNKQEKKRVTYSTVGNVFDTMGLINFIQSKNGPRLVVLNTVQSAAVL
AWKIQKEQKRVIHLSTALTPNDRERIIKKITRCLSNKKDVDWTLVATSCVEAGMDFSFAT
AFRESCSAASLIQIGGRVNRHGNREQAEVFDFRVSDSLMRDNPQLKTSQNVLKTLFEDKY
FEAKDPTEIVTEAMRRELMSDFGDFEKKSLEIIKQERVIDYPDVAKLCKVIDADTRLVVI
APEIAEALKRHEKVASMELIRNSVQIRFFKINSKQFSNFCIPIDGHGEIYEWHGEYDDKF
LGYMKAIIPSLKMEADGYEIV
NT seq 2226 nt   +upstreamnt  +downstreamnt
atgaacagtaaagagccgttggcacacagcgcaaaacctgagaagggcattcctccgcag
acatacgcaaaacatattgcaggtgttatgaagcgagtagctgacaatgtttcagctatg
acacagtatttttcagggaatgtgcaatttttacaggaaatggtaaaacgagcggctttg
cttcatgatttgggtaagctcgatgaggctaatcaagcggtcttaaaaaaaggtggtaag
gggcatttgcccttgaatcacgttgatgcaggcacagcctgtttatccaaaggcaaggaa
tgtgaggctgccctttttgtgtatgggcatcacatcggtttatgttctgtgccatatgag
tctggaaggggagtacagtttttgcgtgatgataaaatttctgaagaggttgatcaaaaa
cttgccgattatcttgcagatcatgaagaatggtgcgggaaggtggagaaatcatcagac
aggattgttaagtcggcatggactagcctgacaagacgactggctttttcatgtctggtg
gatgctgattacggcgatacagccgcgcattatgacggtgaaaccgtgaaacaagtggta
agtcggcgatgggaggaacgccttgagaaattaaaggaatatgttcagggcctgcaaaat
aaatctgacgcctctgaagagcgaaaaatacaaaggcaaaacacttttaaggcatgtcgt
gacgcggatacacagccaagtttatattcatgcgacagtccggtaggcaccggtaagact
acagcagtgatggctcatcttctgtgtgcagcaattgataaagagttgaggcatatattt
gttgtattgccttacacaaatatcatcaagcaatcagtggatgtttatcgtaaggctctt
gtccttccgggtgagaatcctgaagaagtcgttgcagagcaccaccatcaggcagatttt
tccagttatgagttgcgacagtacgcgtctttgtggacagcgccgattactgtaacaacg
gcggttcagttttttgagactttgggagcgaatcatcctgcacaattgcgaaagctacac
gaattgccgggttcagcggtattcttggatgaagcgcatgcagcaatacctacatggcat
tggccgcaggcatggcgctggttgaaagatttgagagataattggcattgtcattttgtg
tttgcatcgggatcgcttcctcaattttggcagaacgagaagatcacaaaaccggctgaa
gatgtgccaaaccttttaggtattaaacagagaatgcaagtaaataagcaggaaaagaaa
cgagtaacatattccaccgtcggaaatgtgtttgatactatgggactaataaacttcata
cagtcaaagaacgggccgaggcttgttgtcttaaatactgtgcaatctgcagcagttctc
gcatggaaaatacagaaagagcaaaaacgtgttatacatctttctacagcgttaacgcca
aatgacagagagagaattattaagaaaatcactcgatgtcttagtaataagaaagatgtg
gactggacgcttgtagcaacgagttgtgttgaagcaggaatggatttttcttttgcgaca
gcttttcgggaaagttgcagtgctgcgagtctgattcaaataggtggccgtgtcaacagg
catggaaatcgagaacaagcagaggtctttgactttcgtgttagcgattcactaatgcga
gataatccgcagttgaaaacatcgcaaaatgtattaaagactctttttgaagataagtat
tttgaggcaaaagatcctacggaaatagttactgaagcaatgaggcgtgaactgatgagc
gatttcggtgattttgagaaaaagtcgcttgaaattataaaacaggaacgagttattgat
tatcctgatgtagcaaaattgtgtaaggtcattgatgcagatacaaggttagtagttata
gcacctgaaatagctgaggctttgaagaggcatgagaaagttgcttctatggagttaatt
cgcaatagcgtacagattcgtttctttaaaataaactcaaaacaatttagtaatttctgt
attcctatagacggtcatggggaaatttacgaatggcatggtgagtatgatgataagttt
ttaggatacatgaaggcgataataccatcgctcaaaatggaggctgatggatatgagatt
gtttag

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