Candidatus Brocadia sp. Ega_18-Q3-R5-49_MAXAC.112v2: IPI25_07295
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Entry
IPI25_07295 CDS
T07026
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
broc
Candidatus Brocadia sp. Ega_18-Q3-R5-49_MAXAC.112v2
Pathway
broc03030
DNA replication
broc03410
Base excision repair
broc03420
Nucleotide excision repair
broc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
broc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IPI25_07295 (polA)
03410 Base excision repair
IPI25_07295 (polA)
03420 Nucleotide excision repair
IPI25_07295 (polA)
03440 Homologous recombination
IPI25_07295 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
broc03032
]
IPI25_07295 (polA)
03400 DNA repair and recombination proteins [BR:
broc03400
]
IPI25_07295 (polA)
Enzymes [BR:
broc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IPI25_07295 (polA)
DNA replication proteins [BR:
broc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
IPI25_07295 (polA)
DNA repair and recombination proteins [BR:
broc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
IPI25_07295 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IPI25_07295 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
NYN_YacP
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QQR67976
LinkDB
All DBs
Position
complement(1583700..1586366)
Genome browser
AA seq
888 aa
AA seq
DB search
MSERFFIIDGHSQCYQAFYAITARLTTSEGTPVNAVYGFTRMLQKLLREHHPEYIAVVFD
TKGITHRHSRYREYKANRKPTPDELQIQIPLIYKIVRAFNIPIYAAKGYEADDVIGTLVK
LLSEKPVEVIIVTADKDMEQLLSPKVKILHAKRGKIIDQESLFTEKGIRPEQVVDVLALS
GDASDNIPGVPGIGNKTALELIQKWGSLESVLENVSLVSGKKRQENLRSFADQARLSQKL
LLLYRDILIPLDMNACKVNTAENTELKKLFRTLGFHTLLTDVVATAKTEETRYQLVDTRE
KFHEFLDQLTTQRIFAIDLETTSKNPLMARIVGISFSWRAREAYYIPLMAPEGTAHLNDD
TVLSKLRVVLEDENIRKIGQNIKYDLLVLRKNNIFLQGVVFDTMIASYLLNPGKRNHNLD
DIAFEYLSYKTITTSEVIGSGREQITMDKADVAKVCEYGCQDADISFRLADVMAPRLKEN
ALSQLLQDIEIPLIYVLSEMEWNGICLDTHVLKEMSDALTIKLQQIKKEIYALSGYEFNI
SSTRQLSEVLFGKLELPRLRRTKTGISTDANVLTTLAWHHTLPKLVLEYRQLMKLKNTYI
DALPGMVNPDTGRIHTSFNQTVTATGRLSSSEPNLQNIPIRTEIGRQIRRAFIPSGKDAV
FLSADYSQIELRILAHFSEDVAMMAAFHQDKDIHSAVASAIYSVPIEKVSSEMRRNAKAV
NFGIVYGLSEFGLSRDTGLSLEKAREFIDAYFVLYQGVKRFRDKVIEEAKVCGYVKTFFH
RKRFIPDLHSEDKKRRNLSERIAVNTIIQGSAADLIKVAMNNIHTKLKKGVYGAKMLLQI
HDELLFEVQKNTLTSARSLVQEEMSRAVTLSVPIKVNIKTGINWMETE
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagcgattttttatcattgatggtcattcacagtgttaccaggctttttatgcc
attacggcaagactgacaacttctgaaggaacacctgtaaatgccgtgtatggatttaca
aggatgctgcagaagttactccgagagcatcatccggaatatatagcagtggtatttgac
acaaaaggtatcactcatagacatagtaggtatcgtgaatataaggcaaaccgtaaaccg
acacccgatgaattgcagatacaaatccctctgatttacaaaatcgtcagggcatttaat
attcccatttacgctgcaaaaggttatgaggcggatgatgtaattggcaccttggtgaaa
ttattatctgaaaagccggtcgaagttattatcgtaaccgcggataaagatatggaacag
ttactaagtccaaaggtaaaaatattacacgcaaaaagaggaaagataattgaccaggag
tctcttttcacagaaaagggtatacgaccagaacaggtagtagacgtactggcactctca
ggcgatgcttccgataatatacctggggtgcctggtattggcaataaaacagcactggaa
cttatccaaaaatggggatcgctggaatcagttctggagaatgtgagtcttgtctccggg
aaaaagaggcaggaaaatttacggtcgtttgcagaccaggcaagactttcccagaaactt
ttacttctgtatcgtgacattcttatcccgttagatatgaatgcatgcaaggtaaatacc
gcagagaacacggaattaaaaaaactgttcaggacattgggatttcataccctccttaca
gatgtggttgcaacggcaaagactgaagaaacgcgatatcaacttgtcgataccagagaa
aagtttcatgaatttcttgatcaattgaccactcagaggatatttgccatagatttagaa
acaaccagcaagaacccgctgatggcaaggattgtggggatttcgttttcctggcgggca
cgagaagcgtattatataccattgatggcaccggaaggaacagcacatttaaacgatgac
accgtactctcgaaactcagggttgttttagaggatgaaaacatcaggaaaatcgggcag
aatattaaatatgacctcttggtgctgagaaagaacaatatttttttgcaaggggtagta
tttgacacaatgattgcttcctacctcctgaatccgggcaagaggaaccataacctggac
gatattgcttttgaatatttatcgtataagaccataacaacatcagaagtaatagggtct
ggaagagaacaaattacgatggataaagctgatgttgcaaaggtttgcgagtatggctgc
caggatgctgatatctcatttcgtttagccgatgttatggctccgcgtcttaaagaaaat
gcgttatcacagcttctgcaggacatagagatacccttaatttatgttttgtccgaaatg
gaatggaacgggatatgtttagacactcatgttttaaaagagatgtccgatgctttaact
ataaaattgcagcagattaaaaaggaaatctatgccttgtcaggatacgagtttaatatc
agttcaaccagacaattgagtgaagtcctttttggaaaacttgaattgccccgcctaagg
cgtaccaaaacaggaatatctactgatgcaaatgtcctgaccactcttgcgtggcatcat
accctgcccaagcttgtcttggaataccgccagcttatgaaattaaaaaatacctatatc
gatgctttgccaggcatggtaaatcccgatactggccgtattcatacctcgtttaatcag
acagtaacagcaacagggcggctcagtagtagcgagccaaacctgcaaaacatccctatt
cgcacggaaattgggaggcagattaggcgggcctttatcccttccgggaaggatgccgta
ttcttatcggcagattattcacagatagaattacgcattctggcacatttctccgaagat
gtggccatgatggcagcatttcaccaggataaggatattcactcagccgttgcctctgct
atttatagtgttccgatagaaaaggtgagttctgagatgcgacgcaatgcaaaggcagtt
aactttggaatagtttacggactgagtgaatttgggctttcccgagatactgggctgtca
ctggaaaaggcacgggagttcattgatgcctatttcgttttataccagggggtaaaaaga
tttcgggataaggtcatagaagaagcaaaggtctgcggttatgtaaaaacgttttttcat
agaaaacggttcatacccgatcttcattctgaagataaaaaacgcagaaatctttctgag
cgtattgctgttaataccataattcaaggctccgctgccgatttaatcaaggttgctatg
aataacattcatacgaagttaaaaaaaggtgtctatggggcaaagatgctccttcaaata
catgatgaattgctttttgaggtgcaaaaaaacaccttaacatcggcacgttctctggta
caagaggaaatgagtcgtgctgttacactgagcgtcccaatcaaagtaaacataaagacc
gggataaactggatggaaacagagtga
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integrated database retrieval system
