Candidatus Brocadia sp. Ega_18-Q3-R5-49_MAXAC.112v2: IPI25_07895
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Entry
IPI25_07895 CDS
T07026
Name
(GenBank) sigma 54-interacting transcriptional regulator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
broc
Candidatus Brocadia sp. Ega_18-Q3-R5-49_MAXAC.112v2
Brite
KEGG Orthology (KO) [BR:
broc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
broc03000
]
IPI25_07895
Transcription factors [BR:
broc03000
]
Prokaryotic type
Helix-turn-helix
Other families
IPI25_07895
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF_2
AAA_5
GAF
AAA
HTH_8
AAA_2
AAA_16
Mg_chelatase
TIP49
GAF_3
bpMoxR
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QQR68109
LinkDB
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Position
complement(1717229..1718857)
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AA seq
542 aa
AA seq
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MNIEFFQSIALSVANERSVSVVFGNIVNGLADSPDVVLARIWLIEPGDLCQGCPWLKNCP
DQMRCLHLVASNGQSLHRKQRYTGLKGHYKRFPLYTTESYDNTATGKIGYIGGTGKAILR
NDIIENPNWLLDPDWAKREKIASFAGQPLVFRGETLGVLALFSRKVLEQSHLVMLRTFAY
NAASAIANARAFEEIEQLRHRLELENEYLRDKVRDVAAFGNIVGRSPALEKILRQIELVA
PTDATVLIHGESGTGKELIALAIHQRSKRKNQPLIKVNCASIPRELFESEFFGHIKGAFT
GALRDRTGRFQLADGGTLFLDEVGDIPLELQSKLLRVLQEGEFERIGEEKTRRVNVRVIA
ATNRDLKKEMEAKRFRHDLYFRLSAFPLEIVPLRERKEDIPLLAKEFVKQICQSMGLKEL
PLKEKHILQLQNYDWPGNIRELRNVIERAVIVSRSSELRLEVPEIHRENALPIVPNYAKK
MEQSGEILTYEDLRRLEKENILNALHKSNWRVSGAGGAAELLGMKPTTLASQMKAFGIHK
RS
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgaacattgaattctttcaatccatcgctttatcagtagccaatgaacgctctgtgagt
gttgtttttggtaatatcgtgaatgggttggctgacagtccggatgttgttcttgccagg
atttggcttatagagccgggtgatttgtgtcagggctgtccctggttgaaaaattgtccc
gatcaaatgagatgtctgcatctggtggcaagtaacggacagtctcttcatcgcaaacag
cgatataccgggctgaaaggtcattataaacgctttcccctttacacgactgaatcgtat
gacaatactgctaccgggaaaattggctatattggtggaactggcaaggctattctacga
aacgatatcattgagaatcctaactggctgctggatccggattgggcaaaacgggaaaaa
atagctagtttcgccggacaaccacttgtctttcggggcgaaacacttggtgtgctggcg
cttttcagcagaaaggtcctggagcaatcgcacctggtgatgctccgaacctttgcctac
aatgctgcgtctgcaattgccaatgccagagcatttgaagaaatcgaacagttacgccac
cgtcttgaactggagaatgaatatctccgcgacaaggtgcgggacgtggctgcctttgga
aacatcgtgggacggagtccagcgttggaaaaaattctccggcaaatcgagctggtagcg
cccaccgacgcgaccgtgctaatccatggagagtcagggacgggaaaagaactcatcgcc
ctggcgattcatcagagaagcaagcgaaaaaatcaacccctcattaaggtcaactgtgca
tccatcccccgggagctctttgagagtgagttttttggacatataaagggcgcattcacg
ggagcgctgagggacaggactggcaggtttcagcttgcagacgggggaacactctttctt
gacgaggtgggagatatacccctggaactgcaaagcaaattactgcgcgtgcttcaggaa
ggcgagttcgaaaggattggcgaggagaagacccggcgggtaaatgtgcgggtaattgca
gcgaccaaccgggacctgaaaaaggagatggaggcaaaacggttccggcacgacctgtac
tttcggttgagcgcctttcccctggaaatcgttcccctcagagaaaggaaggaagacatt
cccctcttagcgaaagaatttgtaaagcagatatgccagagcatggggctgaaggaattg
ccattaaaggaaaagcatattcttcaactccagaactatgactggcctggaaatatacgg
gaactgagaaatgtgattgagcgtgcagtaatcgtgtcgagaagtagtgagttgagattg
gaggtaccggaaattcatagagaaaatgccttaccgatagtgcccaattatgcaaaaaag
atggaacaatcgggtgaaatcctgacgtatgaggatttacgaaggctggaaaaggaaaat
attctgaatgcgctccacaaatcaaattggagggtgtcaggcgctggcggcgcagcggaa
ctcctcggtatgaaacctaccaccctggcatctcaaatgaaggcatttggaattcacaaa
cggtcttag
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