Candidatus Brocadia sp. Ega_18-Q3-R5-49_MAXAC.112v2: IPI25_08985
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Entry
IPI25_08985 CDS
T07026
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
broc
Candidatus Brocadia sp. Ega_18-Q3-R5-49_MAXAC.112v2
Pathway
broc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
broc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IPI25_08985 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
broc03019
]
IPI25_08985 (recQ)
03400 DNA repair and recombination proteins [BR:
broc03400
]
IPI25_08985 (recQ)
Enzymes [BR:
broc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IPI25_08985 (recQ)
Messenger RNA biogenesis [BR:
broc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
IPI25_08985 (recQ)
DNA repair and recombination proteins [BR:
broc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
IPI25_08985 (recQ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
HTH_40
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
ResIII
BCDHK_Adom3
TnsD
HTH_24
RecQ-1-like_HTH
PCI
Motif
Other DBs
NCBI-ProteinID:
QQR68126
LinkDB
All DBs
Position
complement(1962071..1964212)
Genome browser
AA seq
713 aa
AA seq
DB search
MYDLLQKYFGYTSFYPLQEDIIKEVLEHRDVFVLMPTGSGKSLCYQLPALLFSGVTIVVS
PLIALMKDQVDGLLANGIPATFINSSLSYHEIDTRRQQLSNHEIKILYVAPERLLMSEFL
EFVQGLKVSLFAIDESHCISEWGHDFRPEYRQLKVLKEIFPHIPVIALTATATQVVQDDI
IRQLKLSRCKVFRASFNRKNLYYRIKPKQEPLRQILQYLEGQRKDSGIIFCQSRKAVENL
ASGLQKKGYRALPYHAGLTAEVRTEHQERFIRDDVEIIVATIAFGMGIDKPNVRYVIHYD
LPKSIEGYYQETGRAGRDGLPSECILFFSYADKFKIEHFIQQKKDENEKQIAYRQLRELI
TYCESNVCRRKLLLAYFGETFEGPNCGGCDVCLEPKERFDGTIAAQKILSCVYRTGERFG
INYIVEVLLGTRNQKVLQNQHDTLKTYGVGKEYSRLQWQSFIRELIQFGYLRLDGDEYPI
LKLHEKSRPVLLGNEKVSLIKPEEKLPVQKTEEHEAYDHTLFERLRTLRKTLADQEGVPP
YIIFHDTSLKEMTTYYPQSLLDLRKISGVGDQKLMKHGKAFVKEIADYCEQHQIMPKQIA
QEHSESPVRQTKYSTVQTTLGLYQQRLSIHEIAQKRGLALSTIVSHLEKLILNGESISID
EMVDSEKQNHIREVLNKFGMDRLTPVKEKLGDGYSYEEIRLVRVKMMCEGGRK
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacttactgcaaaaatattttggctacacaagcttctacccgcttcaggaagat
attattaaggaggtgctggaacaccgggatgtctttgtcctcatgccaacgggaagtggc
aagtccttgtgctaccaattgccggcgcttcttttcagcggtgtaacaattgtcgtctct
cccttaattgctttgatgaaagaccaggtggatgggttgttagccaatgggattccggcg
acattcattaatagctctttgagttatcacgaaattgataccagaaggcagcaattgtca
aatcatgagatcaagatcctttatgtcgcacctgagaggcttctgatgtctgagtttctc
gaattcgtgcaggggttaaaggtctccctgtttgccattgatgaatcgcattgtatttct
gaatgggggcacgatttccgccccgaataccgccagttaaaagtattgaaggagatattt
cctcacattcctgttatagccttaactgccaccgccacgcaagtggttcaggatgatatt
atcagacaactgaaactgtcccggtgtaaggttttcagagcaagctttaaccggaagaat
ctgtattaccggataaaacccaaacaggagccacttcgtcaaatcctgcaatacctggaa
ggccaaaggaaggattcgggaatcattttttgccagagtcgtaaggcggtggaaaacctc
gcgtcgggtttgcagaaaaaaggatatcgcgctttgccataccatgcggggcttacggct
gaagtcaggacagagcatcaggaacggttcatccgtgacgacgtagagattattgtggca
acgattgcatttggtatgggcattgacaagccgaacgtacgatatgtgatccattacgat
ttaccgaagagtattgaaggatattatcaggagaccgggcgtgccggcagggatgggtta
ccaagtgaatgcattctcttctttagttatgccgataaattcaagatagaacacttcatt
caacaaaaaaaggatgaaaatgaaaaacagattgcatatagacaattgagggaactgata
acgtattgtgaaagtaatgtttgcagaaggaagttgttgctggcctattttggcgagacc
ttcgaagggccgaattgcgggggttgtgatgtctgtttagaaccgaaggaacggtttgat
ggaacgattgctgcacaaaagatattatcctgtgtttacaggacaggtgaacggtttggg
ataaattatattgtcgaggtcttgttaggcaccagaaatcaaaaagtattgcagaaccaa
cacgacaccctgaagacctatggtgttgggaaggaatactcaaggttgcagtggcagtcg
ttcatccgtgaattaattcagtttggatacttaagattggacggggatgaatatcccatt
ctgaaactgcatgaaaaaagccgacctgttttattgggtaacgaaaaggtttctttgata
aagcccgaggagaaactccctgttcaaaagaccgaagagcacgaagcctatgatcatact
ctgtttgagcgtctgaggactttgcgaaaaacactggccgatcaggagggagtgccgcct
tacatcattttccacgataccagcttaaaggaaatgacgacttattatccgcagagtttg
ctcgatttacgaaaaataagtggtgtcggagaccaaaaattaatgaagcacgggaaggcc
tttgtgaaagagatcgccgattattgtgaacaacaccagatcatgccaaagcagatcgct
caggaacattctgaatctcctgtaaggcagacgaaatattctaccgttcaaacgactttg
ggactgtatcagcagcgtctctcgattcatgaaattgcgcaaaagaggggacttgcattg
tctaccattgtttctcatctggaaaaacttattctgaacggtgaaagtatatccatcgac
gagatggttgattcggaaaagcagaaccacatccgagaagtgttgaataaatttggcatg
gatagattaacgcccgtaaaagaaaaactcggagacggctattcctacgaggagataaga
ttggttagggtaaagatgatgtgtgaaggtgggagaaagtaa
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integrated database retrieval system
