Candidatus Brocadia sp. Ega_18-Q3-R5-49_MAXAC.112v2: IPI25_10270
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Entry
IPI25_10270 CDS
T07026
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
broc
Candidatus Brocadia sp. Ega_18-Q3-R5-49_MAXAC.112v2
Brite
KEGG Orthology (KO) [BR:
broc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
broc03032
]
IPI25_10270
03036 Chromosome and associated proteins [BR:
broc03036
]
IPI25_10270
03400 DNA repair and recombination proteins [BR:
broc03400
]
IPI25_10270
DNA replication proteins [BR:
broc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
IPI25_10270
Chromosome and associated proteins [BR:
broc03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
IPI25_10270
DNA repair and recombination proteins [BR:
broc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
IPI25_10270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF3562
HU-CCDC81_euk_2
CRM1_C
Motif
Other DBs
NCBI-ProteinID:
QQR65930
LinkDB
All DBs
Position
2247586..2247903
Genome browser
AA seq
105 aa
AA seq
DB search
MQTTTKRDLCEKIARRTDNTHMVVKKTIQMFLDEIISELAQGNRIELRDFGVFEIRQRAA
RKARNPRTGEVAFVPAKNVVVFKVGKLMREKVGNPTQAQQPSQGA
NT seq
318 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaacgacaaaaagggatctatgcgagaaaattgcccgaagaacagataatacc
cacatggtcgtaaagaaaacaatccaaatgtttttggatgagattattagtgagcttgcg
caaggcaatcgtattgaattacgtgattttggggttttcgaaatacggcaacgtgcagca
cgaaaggcaaggaatccgcggaccggcgaggtggcttttgtaccggcaaaaaatgtagta
gtattcaaagttgggaaattgatgcgggaaaaggttggtaatcccacccaggcacaacaa
ccttcccaaggggcttaa
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integrated database retrieval system
