Candidatus Brocadia sp. Ega_18-Q3-R5-49_MAXAC.112v2: IPI25_12845
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Entry
IPI25_12845 CDS
T07026
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
broc
Candidatus Brocadia sp. Ega_18-Q3-R5-49_MAXAC.112v2
Pathway
broc03420
Nucleotide excision repair
broc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
broc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
IPI25_12845
03430 Mismatch repair
IPI25_12845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
broc03400
]
IPI25_12845
Enzymes [BR:
broc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
IPI25_12845
DNA repair and recombination proteins [BR:
broc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
IPI25_12845
MMR (mismatch excision repair)
Other MMR factors
IPI25_12845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_30
ResIII
AAA_11
DEAD
DUF5659
DUF3726
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
QQR66383
LinkDB
All DBs
Position
2875289..2877493
Genome browser
AA seq
734 aa
AA seq
DB search
MSFLQDVTDKQREAITHVEGPLLVVAGAGSGKTRVITRRIGYLISQGIKPYNILAITFTN
KAANEMDERIKQFSSHKGLWVSTFHKMCARMLRSTIDRLGYSRDFSIYDTTDQLNRVKSI
MAELRLDTTQWKPRTIVSSISNAKNKLIDPATFASTTSGYYNHTVAQIYKKYQTLLKMNN
ALDFDDLLIKTIELFKTHPDVLEMYQDKFRFILIDEYQDTNYSQYTITRLLASRYRNICV
TGDPDQSIYGWRGADIRNIMDFEKDYPDAKVVFLEQNYRSTKHILHAASSIIQQNKYRKQ
KLLWTENVEGEKLQAISCENEHGEADEIAKEIKELAKKGIRYSDIALFYRTNAQSRVLEI
SLRNSGIPYTIIGGLEFYQRKEIKDILSYLRLCINPHDEVALGRTINTPARGIGNTTMKK
LEGWAINHNATIFDTIRQIDVVPEITGKAALSIKRYSELISGFQQLPRSPVEDIIKQVIE
KTNYFAYLRESGETESNDRIANVEELVNAAHEYDIGYSEGTLQGFLEEVALVSDVDEMED
TAEAVTLMTLHTAKGLEFPVVFLTGMEEGLLPHSESNDSDDEIEEERRLCYVGITRAMKK
LFLTHARRRMQYGQTNLCQPSRFLDEIPDEIVDKIDRTNREYSYYPYNNTSSSLAYDIST
AFDPEKITAGTPVAPARETASAFSCGEVVRHPLFGIGRILEVYGSNEKASVKVSFHVGGT
KHLMLAYAKLERIK
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttcttacaagacgttaccgataagcagcgcgaggcaattacccatgtcgaaggc
cccctcctggttgtagcaggtgcaggaagcgggaaaacccgcgtcatcactcgccgtatc
ggctatctgatatcgcaggggataaaaccctacaacatcctggctattacgtttaccaac
aaggcagccaacgagatggatgagcggataaagcagttttcttctcacaaaggcctgtgg
gtctctacgttccacaagatgtgcgcacgaatgctgagaagcaccattgaccgactcgga
tattcaagagacttcagcatctatgacacgaccgaccaactaaaccgtgtcaagtccatt
atggctgagctccgcctggataccacccagtggaaaccccgtacgattgtgagctctatc
agcaacgccaaaaacaaactcattgaccccgcaacctttgcctcaaccacttcgggttat
tacaaccacaccgtagcccagatttacaaaaaataccaaactctgctgaagatgaacaac
gccctcgattttgatgaccttctgataaaaaccatagaattgtttaagacccatcctgat
gttttggaaatgtatcaggacaaatttaggtttatcctcattgacgaatatcaggacacg
aattactcccaatataccatcacacggcttctggcaagccgatacaggaacatctgcgta
acgggcgatcccgaccagtccatctacggctggcgtggtgcagatatcaggaatatcatg
gattttgaaaaggactaccccgatgccaaggtggtctttctcgagcaaaactaccgttcc
acaaaacacatcctgcatgcagcttccagcatcatccagcagaacaaataccggaaacag
aagcttctgtggacagaaaacgtggagggagaaaaactccaggcgatctcttgcgagaat
gaacacggagaagccgacgagattgcaaaggaaataaaagagcttgcgaagaaagggatc
aggtattcggatatagcgttattttatcgtaccaacgcccagtcgcgcgtcctggaaatc
tcgttgagaaactccggcattccttataccatcatcggaggccttgaattttatcaaagg
aaggagatcaaagacatcctttcctatttaaggttatgtatcaatcctcatgatgaggtg
gcattgggacgcacgatcaacaccccggcacgtggtataggaaatacgacgatgaaaaaa
ctggaaggctgggctataaatcataacgccaccatctttgataccatacgacagattgac
gtagtaccggagattacgggcaaagcggccttgtcaatcaaaagatattccgaactcatc
tctggttttcaacaacttccccgatctccggttgaagatattatcaaacaagtgattgaa
aaaacgaactatttcgcctatctccgggaatccggagagacagaatcgaatgaccgcatt
gccaacgtggaagaactggtcaacgccgcacatgaatatgatataggttattctgagggg
acgttacagggttttttagaggaggtggcgctcgtttctgacgtagatgagatggaagat
accgccgaagcagtgactcttatgacactccatacagccaagggactggaattccccgtt
gtttttcttaccggcatggaagagggcttattgcctcactcagaatcaaacgactcggat
gacgagattgaggaggaaaggaggctttgttacgtgggtattacacgggccatgaagaaa
ctcttccttacccatgccaggcgcagaatgcaatacgggcagacgaacctctgccagcca
tccaggtttttggatgagataccagatgaaattgtagataagattgacagaactaaccgg
gagtattcttattatccttataacaacaccagcagcagtttggcgtacgacatatcaaca
gcctttgatccagagaaaatcactgcaggtactccggtcgctccggcaagagaaaccgcc
tcggccttttcgtgcggagaggtggtaagacaccccctttttggaattgggcggatcctg
gaggtctatggcagcaatgaaaaggcaagcgtcaaggtaagttttcatgttggcggcaca
aagcatctgatgctggcttacgcaaaattagaacgaataaaatag
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