Candidatus Brocadia sp. Ega_18-Q3-R5-49_MAXAC.112v2: IPI25_13480
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Entry
IPI25_13480 CDS
T07026
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
broc
Candidatus Brocadia sp. Ega_18-Q3-R5-49_MAXAC.112v2
Pathway
broc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
broc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
IPI25_13480 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
broc03400
]
IPI25_13480 (mutS)
DNA repair and recombination proteins [BR:
broc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
IPI25_13480 (mutS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
AAA_14
AAA_27
ATPase_2
ABC_tran
AAA_22
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QQR66498
LinkDB
All DBs
Position
3014930..3017548
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AA seq
872 aa
AA seq
DB search
MITETPMMRQYNEIKRQHKDSLLFFRMGDFYELFFEDAKLASKVLGITLTARSKGESAVP
MAGVPHHAAETYIRRLIKAGLKVAICDQLQDPDEAKGIVDRGVTRIITPGTVTEDTLLED
KSNNYLMAILNTGNPVGLSWIDLSTGQFEVEDILQERLFDEFARLNPSEVLLPEETVRNN
TAFMEKLRAEGKTMITSRPDWEFSEDTAYRTLTEHFGTTSLEGFGCETIGPALGAAGAVI
HYLKETQKTSLSHIIKIRPYQINNRLLMDRATQQSLELTQTIRNGDREGSLLGVIDQTRT
PMGGRLLRDWVISPLRVSADIKYRQLGVRELFENAALRREIRDMLSNIYDIERISTKISC
GRANARDLISLKQSLSKLPALKEKLAFCIADILIFLEQQLDVLEEVRILIGTSIVPDPPP
TIKEGGLIREGYDASLDELRYLSKNGKNWIANFQAEEIARTGINSLKVGYNKVFGYYIEI
TNVHKDSIPQNYIRKQTIKNAERFITPELKEYETRVLTADERARDLEYDLFFQIREQVST
FTARLQKTSESIAVIDALSTLANLAAENRYVMPEITDDLELKITDGRHPVLDRRLGVESF
VPNDIHLDGTRDTIMVITGPNMAGKSTYIRQIALLVLMAQIGSFIPAKEAVIGTVDRIFT
RVGASDELSRGQSTFMVEMNETANILNNATERSLIILDEVGRGTSTFDGVSIAWAITEYL
YQHIRARTLFATHYHELTELALLFPGIKNFNIAVREWGEEIVFLRKIVEGGTDKSYGIHV
ARLAGIPKEIIQRARTILNNLEAATLDVNGKPKFAPLKTIQDKKQPTQLKLFVSLQDKIL
EEIRKLDISIMSPLDALNKLDELKKKLEREET
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgatcacagagacgcccatgatgcggcaatacaacgaaataaagcgacaacataaggac
tctttgctttttttccggatgggtgatttttacgaattgttttttgaggatgcaaaactc
gcctcaaaggtgctggggattacccttaccgcccggtctaagggtgagagcgcggtcccc
atggcaggtgtgccacaccatgcggctgaaacatatatccggagactgattaaagccgga
ctgaaggtggctatctgcgatcagctgcaagatcctgatgaagcaaaaggaattgttgat
cgcggcgttaccaggattattacgcccggaacggtaaccgaggataccctgttagaggac
aaaagcaataactaccttatggcaatactaaataccggcaatccggtaggattgtcctgg
atcgatctgtctaccggacaatttgaggtcgaagatattctgcaggaaaggctttttgat
gaatttgcacggctgaatccatcggaggtcttattgccggaggaaacggtaagaaataat
acagcctttatggaaaaacttcgggcagaagggaagacgatgattacctccaggcctgat
tgggagttttccgaggacaccgcttacaggaccctgacggaacactttggaaccacatcc
ctggagggatttggctgtgaaacgattggcccagccctgggcgctgccggcgcggtgatc
cactatctgaaggagacacaaaagacatcactcagtcatatcatcaaaattcgtccatat
caaataaacaatcggctgctcatggacagggcaacgcagcaaagcctggagctgacacaa
accatcaggaacggtgaccgtgagggctctttgctgggcgtgatcgaccagacaaggact
cctatgggaggccggttgctcagggattgggtcatcagccctctgcgggtatccgcggat
atcaaataccggcagcttggagtaagggagttatttgaaaatgctgccctacggcgggag
atccgtgatatgttaagcaacatctacgatatcgaacggatttccacgaagataagttgt
ggccgcgcaaatgcccgtgatttaatcagtctgaagcaatccctctcaaaacttcctgcg
ctaaaagaaaaattagcattttgtatcgctgacattttgattttcctggaacaacagctg
gacgtccttgaagaagtgagaatcctgattggcacctcgattgtccccgaccctccgccg
acgattaaagaaggagggcttatcagagagggctatgatgcttcccttgatgaactgaga
tatctcagcaaaaacggaaagaactggattgccaattttcaggcagaagagatcgccagg
acgggaattaattccctcaaagtagggtacaacaaggtatttgggtattatatcgagatc
accaatgtgcacaaggatagtattccgcagaactatatccgaaagcagaccataaagaat
gccgaacgtttcatcactccggaactcaaggagtatgaaacccgggtgctcacagcggat
gagcgtgcaagggacctggagtacgatctcttctttcagattcgtgaacaggtcagcacc
ttcacggcgcggcttcaaaagacgtctgagtccattgcagtcatcgatgcgttatcaacc
cttgcgaatcttgccgcggaaaaccggtatgtcatgccggagattaccgacgatctggaa
ttaaaaatcacggacggacgccaccccgtgctggatcgcagactgggagtagaaagcttt
gtccccaatgatattcatctggatggaacccgggacaccatcatggtaattacaggcccg
aatatggccgggaaaagcacctacattcgtcagatagcgctccttgtgctgatggcgcag
atagggagttttatccccgcaaaagaagcggtcatcggaacggtcgacaggatcttcacc
cgggtgggcgcatcggatgagctttcaagagggcagagcacctttatggtggagatgaac
gagacggcaaatattcttaataacgccacagagcgtagtttgatcattctggatgaagtg
ggacggggcacgagtacctttgatggtgtcagcatcgcatgggcgattactgaatacctc
taccagcacatccgcgccaggacgctttttgctacccactatcacgaacttaccgaactg
gcgctgctctttccgggaattaaaaattttaatattgcggtcagggaatggggagaagag
attgtttttctgcgaaaaattgtggaaggcggcacggataaaagctacggaattcacgtt
gcgcggcttgcgggaatcccgaaggaaattatccagcgagcccgcacaatactcaacaac
cttgaagcggcaacgctggatgtaaacggcaagcctaaatttgcaccgctgaaaaccatt
caagacaaaaaacaaccgacacaattaaagctctttgtgtccctgcaggataaaatactg
gaagagatccggaagcttgatatttccatcatgtcaccccttgatgccctcaacaaactc
gatgaattaaagaaaaaattggaacgtgaagaaacataa
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