Candidatus Brocadia sp. Ega_18-Q3-R5-49_MAXAC.112v2: IPI25_14510
Help
Entry
IPI25_14510 CDS
T07026
Name
(GenBank) PAS domain S-box protein
Organism
broc
Candidatus Brocadia sp. Ega_18-Q3-R5-49_MAXAC.112v2
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
PAS_9
PAS
PAS_4
GGDEF
PAS_3
PAS_8
Response_reg
GAF
GAF_2
PAS_10
Diguanyl_cycl_sensor
GAF_3
Autoind_bind
CAGE1
Motif
Other DBs
NCBI-ProteinID:
QQR66687
LinkDB
All DBs
Position
3232760..3237199
Genome browser
AA seq
1479 aa
AA seq
DB search
MKFLIIDNNQDDRERMKQNLLKEFYGLKFLEIFKREDFDEVIEKGSFDAVITDYLLDWTD
GLWILRTIKGQFPYVPVIMVTDHGNEEIAVEGMKSGLSDYIPKRKMHALPTALKKSLRDA
SFDAGQNKSGNHTKVFPKQYNATETISDYAYSVRVESNGILLCEYATEAFASITGYTLEE
IDGHDGWYSFVCPEDKSVFRKHRDCLLSGQSKTSEFRIITKSGETLWLRDYAQPVWGEEQ
GRVVHIYGTAHNITDRNQMEKHIRLYGEVLNNLQIGLIVWQLENIDDIKTYKLVAANTAA
TLCTGVALEDLIGKTMTECFPDLIETEVPQMYAEVVRSGKVKNLKEDYFSEKGSIKTTFS
VKAFPLSNNCVGIAFVDITESEKMHEELEIFQLLFSEIRDLAYVCDTQGNIIYVNKIFEK
LTGHKPEEFFGKSFSPLFDAENLQKAMDFHKRSVAGESLEFELRFKKTGIVCEFRNFQAR
DENGNVTRTIGIARDITERRHAEEALRESHKRLTTILDSLNAVVYVADMKTYEILYTNKY
VQDLCGDTTGKICWETFQASQGNPCNFCTNHKLLDADGNPAGIYSWEFLNTVDGRWYSIS
DRAIRWVDGRIVRLEIATDISTLKQAEEALRAMNHTLQALIQASPLAIIAIDLRGNVTLW
NQAAERIFGWNQQEVIGCPLPIVSEEKQEEFRALCERVLRGDSFTGAEVRRRRRDGSLVD
ISLSTASMRDGQDNVNGIVGVAADITHLKQTQLIDALFHEIDQFVLRGQSPDVILPYVCT
RLTEIFAYPLVWIGMKETDGTVRVSAQAGTHTDYLDDFKTQWKDLPEHECIIDFAIHTGK
ACSIMEEKESVFRRCRERACQYGLRSFFTAPLHSEGEVIGTLNLYDQRTDVFDAKAILML
ENLAARISISLLVARDQQQLRLLSTAMASVANAVFITDNAGRITWVNEAFTKLSGFTPDE
VSKQTPRLFKSGRHDLAFYQQVWQTILAGKVWNGEVINCRKDGSLYIVNQTITPLLDPKG
KARHFVAVHEDITEKKEAEKRIVYMAHYDTLTNLPNRILFSDRLRQEMIHAHRNKGLTSV
IFLDLDRFKTINDTLGHTFGDLLLKAIAERLKTCIREGDTVSRLGGDEFIFIISDITHPQ
DVALIAQKILHALSVVFHLDGHEVHVTSSIGIAFYPLDADDMDNLIKKADVAMYHAKEQG
GNSFKFYMEDMNINNLERLMLENDLRKALVNNELTVYYQPLVDQNTGQVTSLEALIRWHH
PIRGMLYPDKFIPIAEETGLIIPIGEWALKTACAQTKAWHDAGFSGLRITVNLSVRQLSQ
QNLVNIITRVLKETGLDPKYLELELTEGIIMRNDMAVLAVLRGLKSLGILFSIDDFGIEY
SSLSYLKRFPVDTLKIARSFVQDITTNPDDAAIVTAIIAVAKSLKMRIVAEGVESKEQAD
FLRGLHCNTIQGYLYSRPLSAVDIDQFLQKGVPGDFKLQ
NT seq
4440 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttctgattattgataataaccaggatgaccgtgagcggatgaaacagaatctt
ttgaaggagttttacggcttaaagtttctggagatttttaaacgggaggattttgatgag
gttatcgaaaaaggcagcttcgatgctgtaattaccgattatctcctagactggacagac
ggattatggattctccggacgatcaagggacagttcccttatgtgccggtaatcatggtt
actgatcacgggaacgaggaaatagccgttgaaggaatgaaatcgggtctgagcgactat
atcccgaagaggaaaatgcacgcattaccaacggcattgaagaaaagtctgagggatgcc
agttttgatgcgggacaaaataaatcgggaaatcacacgaaagtttttccaaagcaatat
aatgccacagaaactatttctgactatgcgtattcggtgcgcgttgaatccaacggcatc
ctcttatgtgaatacgcaaccgaagcctttgcttcaattaccggatatacccttgaagaa
atagatgggcatgacggctggtatagttttgtctgtccggaagataaatccgttttccgc
aagcaccgggattgtcttctttccggccaatcgaagacaagtgaattccgcatcattaca
aaaagtggtgaaacgctatggttgcgtgattatgctcagccggtgtggggagaggaacaa
ggccgtgttgtccatatctatggtacagcgcacaatattaccgaccgcaatcagatggaa
aaacatatccggctctatggagaagtcttaaataatctgcaaataggcctgattgtctgg
cagttagagaatatcgatgatataaaaacctataaacttgttgccgcaaatacggcagca
accctatgtaccggggtggcattggaagatcttatcggaaagactatgacagaatgtttc
cctgacctcattgaaacagaagtcccgcagatgtatgccgaagttgtccgttccgggaag
gtaaaaaatttgaaagaagattacttttctgaaaaaggcagtataaaaacgactttttcc
gtcaaagcctttccactttcaaataattgtgtggggatagcgttcgtggatattactgaa
agcgagaagatgcatgaagaattggaaatatttcaattgctgttttctgaaataagagac
ctcgcatatgtttgtgatacgcaaggtaatattatatatgtaaacaagatctttgaaaaa
cttacaggtcataagcctgaagaattctttggaaaatcattttctcccctttttgatgcg
gagaatctgcaaaaagcaatggactttcataaaagaagcgtggcgggagaaagtctggaa
tttgaactcaggtttaagaaaacgggaatagtatgtgaattcaggaattttcaggcacgg
gacgaaaacggaaacgtcacgaggactattggcattgccagagatatcacggaacgcagg
catgcggaagaagctttacgggaatctcataaacgacttaccactattttggacagtctg
aatgccgtggtatatgttgcggacatgaagacctatgaaatcctgtataccaacaaatat
gtgcaggatctttgcggggatacaaccggcaaaatctgctgggagacatttcaggcaagc
cagggaaatccgtgtaatttttgcaccaaccataaacttttagacgccgacggaaatcct
gcaggaatatactcatgggaatttctgaataccgttgatggccggtggtattcaatttcc
gacagggcaatcagatgggtagacggccgtatcgtcagactggaaatagcaaccgacatc
agcacgctcaaacaagccgaagaagcgttgagagccatgaaccacacccttcaggcattg
attcaggcctcgccgctggctattatcgccatcgatctccggggaaatgttaccctgtgg
aatcaggctgccgagcgtatattcggctggaatcagcaggaagtgattggttgtcctctt
cctattgtttccgaagaaaaacaggaagagttccgtgcactttgtgaaagggtattacgg
ggagactcgtttaccggcgcagaggtgcgtcggaggaggcgcgatggttctctggttgac
atcagtctctccacggcgtcaatgcgggatgggcaggacaacgtgaatggcatcgtggga
gtggctgcagatattacacacctcaaacaaacccaactcattgacgccctgtttcacgag
attgatcaatttgtactacgaggacaatcgccggatgttatcctgccgtacgtatgcacg
cgtcttacagaaatttttgcctatcccctggtctggatcggtatgaaagaaacagatggt
acggtgagagtctcggcacaagccggcacccacacagattatcttgatgatttcaagaca
caatggaaagatcttcctgagcatgaatgtatcattgactttgccatacataccgggaag
gcatgtagtatcatggaagaaaaagaatcagtcttccgacgatgtcgggaacgcgcttgt
cagtacggattgcgatccttttttaccgctcccttacactccgagggtgaggtaattggg
acattaaatttgtatgaccaaagaacggatgtgtttgatgcgaaagcaatccttatgctg
gaaaatctggctgcccgaattagtatctctttgttagttgcgagagatcaacaacaatta
cgcctgcttagcactgccatggcatcggtggccaatgctgtatttattaccgataatgcg
ggacgcatcacctgggttaacgaagcatttaccaagctgagtggatttacgccagacgag
gtcagcaaacagaccccgcgactgttcaagtcgggcaggcatgatctcgcattttatcaa
caggtatggcagacgatacttgcaggaaaggtttggaatggggaggttataaattgccga
aaagacggcagcctttacatcgtgaaccagaccattaccccactcctggacccgaaagga
aaagcgcgccactttgttgcggtacatgaggatattacagagaagaaggaggcagaaaag
cggattgtttatatggcacattacgacacattaacaaatctgcctaaccgtattttattt
agtgatcgtctgcgtcaggaaatgatccatgcacatcggaataaaggactgacatcggta
atatttctcgatttggatcggtttaaaacgattaatgatactttggggcatacctttgga
gatctgttactgaaggccattgcggaacgcctgaagacttgtatacgtgaaggcgatacg
gtgtcacgattaggtggagacgaatttatttttattatctcagacattacccatccgcag
gacgtcgctcttatagcacaaaaaattctccatgccctgtctgtcgtctttcacctcgat
gggcacgaagtacatgtgacttccagcattggcattgccttctatccgctggatgcggac
gacatggacaatctgattaaaaaggctgacgttgccatgtaccatgctaaagagcagggc
gggaattccttcaaattctacatggaggacatgaatatcaataaccttgaaaggttgatg
ctggaaaatgatctccgcaaggcactggtaaacaatgagttgaccgtatattatcagccg
ctggtcgatcagaatacgggtcaagttaccagcctggaagcgctaatacgctggcatcac
cccattcggggaatgctctaccctgataaattcatccctattgccgaggaaaccggcctt
attattcctattggcgagtgggcgctgaagaccgcctgtgctcaaaccaaagcatggcac
gatgccgggttttccggacttcgtattaccgttaatctttccgtgcggcagctttcgcaa
cagaatcttgtaaacataattacccgcgtgctaaaggagacaggtcttgacccgaagtat
ctggagttggaactcacggaaggtattattatgcgaaacgatatggctgttcttgctgtg
ctccggggattgaagtctcttggtattcttttttctatcgatgattttggtatcgaatat
tcctctctgagctatttgaagcgcttccctgtagataccctcaagattgcccggtccttt
gtacaggacattacgacaaatcctgatgacgcggcaattgtcaccgctatcatcgccgta
gcaaaaagcctcaagatgaggatcgttgctgaaggtgtcgaaagcaaagaacaggctgac
tttcttcgcggactccactgtaacactattcagggctatctttacagccggcctttatca
gcagtagatatagatcagttcttgcaaaaaggcgtgccaggggatttcaaattgcaataa
DBGET
integrated database retrieval system
