Brooklawnia propionicigenes: brsh051_21680
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Entry
brsh051_21680 CDS
T09125
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
broo
Brooklawnia propionicigenes
Pathway
broo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
broo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
brsh051_21680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
broo03021
]
brsh051_21680
03400 DNA repair and recombination proteins [BR:
broo03400
]
brsh051_21680
Enzymes [BR:
broo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
brsh051_21680
Transcription machinery [BR:
broo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
brsh051_21680
DNA repair and recombination proteins [BR:
broo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
brsh051_21680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
BEH02887
UniProt:
A0AAN0KAS9
LinkDB
All DBs
Position
2382652..2386542
Genome browser
AA seq
1296 aa
AA seq
DB search
MLDANTYDQLRIGLATADEIREWSFGEVKKPETINYRTLKPERDGLFCEKIFGPTRDWEC
YCGKYKRVRFKGIVCERCGVEVTRSNVRRDRMGHIELAAPVTHIWYFKGVPSRLGYLLDI
APKDLEKVIYFAAYMITRVDDDARHRDLPSLEAKVADERAHLEKRRDADIEARSVKLEED
LAALESEGAERDTRKKVRDSAEREMKHLRDRAQRDLDRLDAVWTRFKTLKVQDLEGDEVL
YREMKTRFGRYFEGYMGAEAIQKRLESFDLAAEADSLREIIRSGKGQRKTRALKRLKVVR
AFLDTGNSPLGMVLNAVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSISDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLAEQNYAQNIKSAKRMVERQR
PQVWDVLEEVIREHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQLHPLVCAAFNADFDGDQ
MAVHLPLSTEAQAEARILMLSSNNILKPADGRPVALPSHEMIIGMYYLTQNLDGLRGEGR
VFSSVEEAIMAYDLHEIDIRSKIKVRMRDITPPARLADKVRPDGTLLMDTTLGKIIFNEA
MPDSYPFVESHVGKKQLGAIVNQLAEQYPKTVVTEVLDALKDMGFKWGTRSGVTVSIGDV
QTPPDKPEIMAGYDTKAAKIDKLYERGAVTEDERREELIRIWTDATAELTSAMEANFSAT
NPIYMMVNSGARGNMTQMRQIAAMRGLVANPKGEIIARPIKSNFREGLTVLEYFISTHGG
RKGQADTALRTADSGYLTRRLVDVSQDVIIREEDCGTERGLTKVIAAADETGVLRQVKAL
DTTVVGRNLATDAVTDSGEVVVAAGTDVTEDHIKVLVAAGVTTIKVRSVLTCEAASGACA
MCYGRSLAGGKLVDVGEAVGIQAAQSIGEPGTQLTMRTFHTGGVAGDDITLGLPRVVELF
EARTPKGKAPIAEADGRIKIEDGDRGRKLLIVRDDGQSDVEYVVPRRARLEFDDHEGVHR
VIADGDHVNVGDQLTAGTIDPQDVLRVQGVRKVQEHLVAEVQKVYATQGAPIHDKHIEII
IRQMLRRVTVIDSGDTEMMPGELIDRQSYEQANRKALTEGGRPAEGRPVLMGITKASLAT
DSWLSAASFQETTKVLTDAAINGKSDHLLGLKENVILGKLIPAGTGLERYRNIRVEPTAE
ARANAYTLSYDAFDYDFGSGSGAAVPLDDMDYRDLR
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
gtgctggatgccaatacctatgaccagctgcgcatcgggctggcgaccgcggatgagatt
cgtgagtggagcttcggcgaggtcaagaagccggagaccatcaactaccgcacgctgaag
ccggagcgggacggtctgttctgcgagaagatcttcggcccgacccgtgactgggaatgc
tactgcggcaagtacaagcgcgttcgtttcaagggcatcgtgtgtgagcgctgtggcgtc
gaagtgacccgcagcaatgtgcgccgcgaccgcatgggccacatcgagctggctgccccg
gtgacccacatctggtacttcaagggcgtgccgagccggctgggctacctgctggacatc
gcgccgaaggacctcgagaaggtcatctatttcgccgcgtacatgatcaccagggtggac
gacgacgcccgtcaccgcgacctgccgagcctggaggccaaggtcgccgacgagcgcgcc
cacctcgagaagcgccgcgacgccgacatcgaggcccgcagcgtgaagctcgaggaggat
ctcgcagcgctggagtccgaaggtgccgagcgcgatacccgcaagaaggtgcgcgactcc
gccgagcgcgagatgaagcacctgcgtgaccgtgcccagcgtgacctcgaccgcctggac
gccgtgtggacccgcttcaagaccctcaaggtgcaagacctcgagggcgacgaggtgctc
taccgcgagatgaagacccgcttcggccgctacttcgagggctacatgggtgccgaggcg
atccagaagcgtctggagagcttcgacctggccgcagaagccgactcgctgcgcgagatc
atccgcagcggcaagggccagcgcaagacccgcgcgctcaagcgtctcaaggtcgtgcgc
gccttcctcgacaccggcaactcgccgctcggcatggtgctgaacgcagtcccggtcatc
ccgcccgacctgcgcccgatggtgcagctggacggcggccgcttcgcgacctccgacctc
aacgatctgtaccgccgcgtgatcaaccgcaacaaccgtctcaagcggctgctcgatctg
ggtgctcccgagatcatcgtgaacaacgagaagcgcatgctgcaggaggccgtggactcc
ctgttcgacaacggtcgccgtgggcgtccggtcaccggcccgggcaaccgtccgctgaag
tcgatcagcgacatgctgaagggcaagcagggccgcttccgccagaacctgctgggcaag
cgcgtcgactactccggccgttcggtcatcgtggtcggcccgcagctgaagctgcaccag
tgcggcctgccgaagcagatggctctcgaactgttcaagccgttcgtgatgaagcggctc
gccgagcagaactacgcgcagaacatcaagagtgccaagcgcatggtggagcggcagcgt
ccgcaggtctgggacgtgctcgaagaggtcattcgtgagcatccggtgctgctgaaccgc
gcaccgacgctgcaccgtctgggtatccaggcgttcgagccgcagctcatcgagggcaag
gcgatccagctgcacccgctggtctgtgcggcgttcaacgccgacttcgacggcgaccag
atggcagtccatctgccgctgagcaccgaggcgcaggccgaggcccgcatcctgatgctg
tcgagcaacaacatcctcaagcctgccgacggccgcccggtcgccctgccgagccacgag
atgatcatcggcatgtactacctaacgcagaacctcgacggtctgcgcggggagggccgg
gtcttcagctcggtcgaagaggccatcatggcctacgacctgcacgagatcgacatccgc
tccaagatcaaggtccggatgcgcgacatcaccccgccggcccggctggccgacaaggtg
cgtcccgatggcacgctgctcatggacaccaccttgggcaagatcatcttcaacgaggcc
atgcccgacagctacccgttcgtcgaaagccacgtcggcaagaagcaactcggcgcgatc
gtcaatcagctggccgagcagtacccgaagaccgtggtcaccgaggtgctcgatgcgctg
aaggatatgggcttcaagtggggtacccgctcgggtgtcacggtgtccatcggcgacgtg
cagaccccgcccgacaagccggagatcatggccggctacgacaccaaggccgccaagatc
gacaagctctacgagcgtggcgcggtgaccgaggacgagcggcgcgaggaactcatccgg
atctggaccgacgcgacggccgaactgaccagcgcgatggaagccaacttctcggcgacc
aacccgatctacatgatggtgaactcgggtgctcgaggaaacatgacccagatgcgccag
atcgccgccatgcgaggcctggtggccaacccgaagggcgagatcatcgcccgcccgatc
aagtcgaacttccgcgaaggcctgaccgtgctggagtacttcatctccacccacggcggc
cgcaaggggcaggccgacaccgcactgcgtaccgccgactcgggttacctgacccgtcgc
ctggtcgacgtctcgcaggacgtcatcatccgcgaggaggactgcggtaccgaacgtggt
ctcaccaaggtgatcgcagccgcggacgagaccggggtgctgcgtcaggtgaaggcgctg
gataccaccgtggtcggccgtaacctggccaccgacgcggtgaccgattcgggcgaggtc
gttgtcgcggccggcaccgatgtgaccgaagatcacatcaaggtcctggttgccgccgga
gtgaccaccatcaaggtgcgttcggtgctcacctgtgaggccgccagcggtgcctgcgcg
atgtgctacggacgttcgctggccggcggcaagctggtcgatgttggcgaggccgtcggt
attcaggccgctcagtccatcggcgagcccggcacccagctgacgatgcgtaccttccac
accggtggtgtggcgggcgacgacatcaccttgggtctgccgcgtgtggtcgagcttttc
gaagcccgcactccgaagggcaaggcgccgatcgccgaggccgatggtcgcatcaagatc
gaggacggcgaccgcggccgcaagctgctcatcgtccgcgacgacggccagtccgatgtc
gagtacgtcgttccgcgtcgtgcccggctcgagttcgatgaccatgagggtgtgcaccgc
gtgatcgccgacggtgatcacgtcaacgttggcgatcagctgaccgctggcacgatcgac
ccgcaggacgtcctgcgggttcagggtgtgcgcaaggtgcaggagcatctggtggccgag
gtgcagaaggtctacgcgacccagggcgccccgattcacgacaagcacatcgagatcatc
atccggcagatgctgcgccgcgtgacggttatcgactcgggcgacaccgagatgatgccc
ggcgaactgatcgatcgtcagtcctacgagcaggccaaccgcaaggcgctcaccgagggt
ggacgtccggcagagggccggcccgtgctgatgggcatcaccaaggcgtcgctggcaacc
gactcctggctgtcggcggcctccttccaggagaccaccaaggtgctcaccgacgctgcg
atcaacggcaagtccgatcacctgctcggtctgaaggagaacgtgatcctcggcaagctg
atcccggcaggcaccgggctggagcgctaccgcaacatccgggtcgagccgaccgccgag
gcacgggccaacgcctacacgctcagctacgacgcgttcgactacgacttcgggtcgggc
agtggcgcggcggttccgctggacgatatggactaccgcgacctgcggtga
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