Brooklawnia propionicigenes: brsh051_27380
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Entry
brsh051_27380 CDS
T09125
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
broo
Brooklawnia propionicigenes
Pathway
broo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
broo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
brsh051_27380 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
broo03400
]
brsh051_27380 (recD)
Enzymes [BR:
broo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
brsh051_27380 (recD)
DNA repair and recombination proteins [BR:
broo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
brsh051_27380 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
RecD_N
UvrD-helicase
SH3_13
AAA_22
Herpes_Helicase
UvrD_C
TraI_hel_assoc_N
SLFN-g3_helicase
NAT10_TcmA_helicase
AAA_7
AAA
AAA_5
AAA_16
AAA_28
Motif
Other DBs
NCBI-ProteinID:
BEH03457
UniProt:
A0AAN0KBJ5
LinkDB
All DBs
Position
complement(2995380..2997161)
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AA seq
593 aa
AA seq
DB search
MTDEVFEVPVVATGLLAEFAAAGLISASGVHLARTLSWLTGECRDEVLLAVALCLRAQDS
GSVCLPLDEPHSVAGELPWPDPAGWQLLLAESPLVVVGAEAAANQRPLRLIGHRLYLERN
WQSEEAVRTALAQRIALPPPALDRQAVADAVMRVSRQRSAAQELTADQCAAVDTSVSTWT
SVIAGGPGTGKTTTIAGLLRVLDDLVTHRTSVALASFTGKAAARMQQSLDASLSGSDRDG
AVWKHLQVQPATTLHALLGARPGGRMTRDAGNPLPHDLLIIDEMSMVSLDLMAALMAALR
PGTRLVMVGDPHQLSSVDAGAVLADIVSAGLPAAGGSPRSAITVLTHSHRFAGPIQHLAD
AILASRADDVLDLLASAPDGLTWAQTDPDPVLVETLNPLTADVVTQGRAMVSAARAGDAV
QALSAMDAHRVLCAHRQGRYGVGGWSRAAEAELRRAILGYGREGEWYLGRPVLITRNAPD
LQISNGDTGVVVRIDGQIQVALSSGDNPRLRSPWLLDSSETMHAMTVHKSQGSEYDAVTV
VLPSAESPLLTRELFYTAVTRARQRVRIVGTAEAIRQAVTTAARRATGLGGRV
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgaagtgttcgaggttccggtggtcgccaccgggttgctcgccgagttcgcg
gccgccggcttgatctcggccagtggggtgcacctggcccgcacattgtcgtggttgacc
ggggaatgtcgcgacgaggtgttgctggctgtggcgctgtgcctgcgtgcacaggactcc
gggtcggtctgcctaccgctggacgagcctcactcggtggccggcgagctaccgtggccc
gacccggcggggtggcagctgctgctcgccgagtcgccattggtggtggtcggcgcggag
gccgcggcgaatcagcgcccgctccggttgatcggccaccggctctatctggaacgcaac
tggcaatccgaggaagctgtccgcacggcactggcgcagcgcatcgccctgccgccgccg
gccctcgaccggcaagccgtcgccgacgccgtgatgcgggtctcgcggcagcgatccgcc
gctcaggaactgaccgcagaccaatgcgccgccgttgacacctcggtgagcacctggacc
agcgtcatcgcgggcggtccggggaccggcaagaccaccaccatcgccgggttgctgcgc
gtcctggacgatctggtgacccaccgcaccagcgtcgcgctggcctcgttcaccggcaag
gccgcggcccgtatgcagcagtccctggacgcgtcgctgagcggctccgaccgggacggt
gcggtctggaagcatcttcaggtgcagccggccaccaccctgcatgcgctgttgggggcc
cgtccaggcggacgcatgacacgtgacgccggcaatccgctgccgcacgatctgctgatc
atcgatgagatgtcgatggtctcgcttgatctgatggcggcgctgatggccgcgttgcgc
cccggcacgcggctggtcatggtcggtgacccgcatcagctgtcctcggtggacgcgggt
gcggtgctcgccgacatcgtcagcgccggcctgcctgcggccggcggatcgccgcgcagc
gccatcacggtgctcactcactcgcaccggttcgcgggcccgatccagcaccttgccgac
gccatcttggcgtcccgggccgatgacgtgctggacctgctggcgtcggctcccgacggg
ctgacctgggcccagaccgatcccgatcctgtgctggtcgagaccctcaatcccttgacc
gcggatgtggtcacgcaggggcgggccatggtgagtgcggctcgcgccggggatgccgtg
caggcgctcagtgcgatggatgcccaccgcgtactgtgtgcgcaccggcagggacgctac
ggggtgggcggctggtcgcgtgcggccgaggccgaactgcgacgggcgatcctcggatac
ggacgcgagggcgagtggtatctgggccggccggtgctgatcacccgcaatgcccccgac
ctgcagatctccaatggggacaccggcgtggtcgtgcggatcgacggccagattcaggtg
gccctgtcgagcggggacaacccgcggctgcgctcgccgtggctgctggactccagcgaa
acgatgcacgcgatgaccgtgcacaagtcgcagggcagcgagtacgacgcggtcaccgtg
gtgctgccctcggccgagtcgccgctgctcacccgggagctcttctacaccgcggtcacc
agggcgcggcagcgggtgcggatcgtcggcaccgccgaggcgatcaggcaggcggtcact
accgcggcccggcgggcgaccggcctggggggccgcgtctag
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