KEGG   Bacillus rossius redtenbacheri: 134527354
Entry
134527354         CDS       T09888                                 
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4 isoform X1
  KO
K12623  U6 snRNA-associated Sm-like protein LSm4
Organism
bror  Bacillus rossius redtenbacheri
Pathway
bror03018  RNA degradation
bror03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:bror00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    134527354
  09123 Folding, sorting and degradation
   03018 RNA degradation
    134527354
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bror03019]
    134527354
   03041 Spliceosome [BR:bror03041]
    134527354
Messenger RNA biogenesis [BR:bror03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     134527354
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     134527354
Spliceosome [BR:bror03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    134527354
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 134527354
NCBI-ProteinID: XP_063216032
LinkDB
Position
1:complement(232611455..232643951)
AA seq 134 aa
MLPLSLLRTAQNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDKFWRMPECY
IRGSTIKYLRIPDEVIDMVKDETIVKGRGRGEMKGRGGQARGRGVGRGAFGGRGGRSAPL
GRGGPKHPLKQKNK
NT seq 405 nt   +upstreamnt  +downstreamnt
atgttgccgctgtcattattgagaaccgctcagaatcatccaatgctggttgagctcaaa
aatggagaaacttacaacggtcatttagtaagttgtgataactggatgaacatcaactta
cgagaagtcatttgtacttcacgtgatggagacaagttctggaggatgcccgagtgttac
atcaggggcagcaccataaagtacttgcggatcccagatgaagttattgacatggtaaag
gatgaaacgatagtcaaagggagaggccgtggtgaaatgaaaggcaggggtggccaggcg
agaggacgtggtgttggcagaggagcgtttggtggtcgcggtggtagatcagctcctttg
ggtcgcgggggccctaaacaccctctcaaacaaaagaataaataa

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