Bacillus rossius redtenbacheri: 134528261
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Entry
134528261 CDS
T09888
Name
(RefSeq) protein suppressor of forked
KO
K14408
cleavage stimulation factor subunit 3
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134528261
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bror03019
]
134528261
Messenger RNA biogenesis [BR:
bror03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
134528261
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Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
NRDE-2
Lectin_C_term
Motif
Other DBs
NCBI-GeneID:
134528261
NCBI-ProteinID:
XP_063217787
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Position
1:355024520..355062909
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AA seq
729 aa
AA seq
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MFDKQSAIMTNEKIEIDWGNEKLFKAQKQIEDNQYDLEAWSLLAREAQGKWIDDVRPMYE
KLVSTFPSTGRYWKIYIEQEMKTRHFEKVEKLFQRCLMKVLNIELWKLYLTYVKETKSIL
PSYKEKMAQAYDFALEKIGMDIQSYSIWNDYVNFLKGVEAIGSYAENQKISAVRKVYQRG
VINPMVNIEQFWKDYMNFEQNINPIIAEKMAMERSRDYMNARRVAKEFEAVTRGLNRNAP
STPPTGHMEELKQVDLWKKYIAWEKSNPLRTEDTTLITRRVMFAYEQCLLCLGHHPDIWY
EAAQFLEQSSKLLTEKGDVNAAKLFSDEAATIYERATASLLSKNMLLYFAYADFEEGRLK
YEKVHQIYSRFLDIPDIDPTLAYVQYMKFARRAEGIKAARTVFKRAREDVRSKYHVFVAA
ALMEYYCSKDKNIAFRIFELGLKKFSDNPDYILCYIDYLSHLNEDNNTRVLFERVLSSGN
LEPEKSVEIWNRFLEFESNIGDLASIVKVEKRRSTVLQQIKEFEGKETAQLVDRYKFLDL
YPCSATELKSIGYNEVAKTSIKFHSLSTAVLDTGEDSVNVPKPDVTMMIPFKPKSHTVPG
DHPVPGGVFPQPPAVAQLCTLLPPPDCFQGPFVSVDMLMDVFNKIQLPETPLLPTGENDN
DIKLFDLAKSIHWIVDDSQDGSLSISSGLNHKRRRRALNDRGDDSEDDDMAGAPPINDIY
RARQQKRVK
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgtttgacaaacagtctgccatcatgaccaacgaaaaaatcgaaatagattgggggaac
gagaagttgttcaaggcccagaagcaaatagaagacaaccagtacgaccttgaagcatgg
agtctccttgcacgagaagcgcaagggaagtggattgacgatgtgcggcccatgtacgag
aaactggtctctacattcccaagcacgggacgttattggaagatatacattgaacaggag
atgaaaactagacattttgaaaaagttgaaaaattatttcaaagatgtctcatgaaagtg
ttgaatattgaattgtggaagctgtatttaacttacgtaaaagaaaccaagtccatcttg
ccatcttacaaagagaaaatggcacaagcatatgactttgctttggaaaaaatcgggatg
gacattcagtcgtactccatttggaatgactacgtgaacttcctaaaaggcgtggaagcg
ataggctcatatgcagaaaatcagaagatcagtgctgttaggaaagtgtatcagcgagga
gtgatcaatcctatggtgaatattgaacaattctggaaagactacatgaactttgagcaa
aacatcaatcctattatcgcggaaaagatggccatggaacgaagcagggattacatgaat
gcacgacgcgttgccaaggagtttgaagctgtgacgagagggttgaacagaaatgcccca
agcaccccaccgactggtcacatggaagagttgaagcaagttgacctatggaaaaagtac
attgcctgggaaaaatcaaacccattgagaactgaagacacgaccctgataacccggcgt
gttatgtttgcctatgaacagtgcctgctgtgtttggggcatcatccggacatatggtat
gaggcagcacagtttttggagcagagctccaaactgctgacggagaaaggagatgttaat
gcggccaagttgttcagtgatgaggctgccactatttacgaacgtgccactgcctccctt
ctgagtaaaaatatgcttttgtactttgcttatgctgacttcgaagaaggccgtctgaag
tacgaaaaggttcaccagatctacagtcgtttcctggacattccagacatagatcccact
ttggcctacgtgcagtacatgaagtttgctcgcagggctgaaggtattaaagcagcaagg
acggtcttcaaaagagcgagggaagatgtgagatcaaagtaccatgtttttgttgcagct
gcattgatggaatactattgtagcaaagacaaaaacattgctttcagaatatttgagttg
ggcttgaaaaagttttctgataatccagactacattttatgttacattgattatttgtct
cacctgaatgaagataacaatactcgtgttttatttgagagagtactgtcatctgggaac
ctagaaccggaaaagtcagtggaaatttggaacagattccttgaatttgagtcgaacatc
ggagatcttgcaagtatcgttaaagttgagaaaagaaggagcactgttctgcagcagata
aaggaattcgaaggcaaagaaactgctcagttggtggacaggtacaaattcttggacctg
tatccttgctctgccacagagttgaagtctatcggctacaacgaggttgcgaagacatcc
ataaaattccactctctgtccactgcagtgctggacacaggcgaagactcagtgaatgtt
cccaaacctgatgtgaccatgatgatacctttcaagcccaagtcccacactgttcctgga
gatcatcctgtcccaggaggtgtgttccctcagcctccggcggtggcacagttgtgtacg
cttctcccgcctccggactgtttccaaggtccctttgtgtctgtcgacatgctcatggac
gtgttcaacaagatacagttgcccgagacaccgctgctgcctaccggggagaacgataat
gacattaaactttttgatcttgcaaagtcaatacactggattgtggacgatagtcaggac
ggttctttgtcgatttcgtccgggctgaatcataaacggcggcggcgtgctctcaacgac
aggggcgatgacagtgaagatgatgacatggctggagcaccaccgataaatgatatttac
agagctagacagcagaaacgtgttaagtga
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