Bacillus rossius redtenbacheri: 134528479
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Entry
134528479 CDS
T09888
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror04620
Toll-like receptor signaling pathway
bror04624
Toll and Imd signaling pathway
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
134528479
04624 Toll and Imd signaling pathway
134528479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bror03000
]
134528479
Transcription factors [BR:
bror03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
134528479
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank
Ank_2
Ank_3
Ank_4
Ank_5
Fimbrial_CS1
Motif
Other DBs
NCBI-GeneID:
134528479
NCBI-ProteinID:
XP_063218197
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Position
1:372329982..372385142
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AA seq
1014 aa
AA seq
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MAFTMTLANGGIVMNEFFSPGIRDTMNIGSPSSVSQSSADSQDSSGALQWLTPVATTAVS
LSPLELHAMSLNDIDASGAPRLEIREEPIEKFRFRYKSEMLGTHGSIVGRNSEKYRKKTY
PTVELVNYHGTAIVRCSLYTAELRPEKRSLHTHRLVVRQGSEDKDDPHDILVSPEVGYTA
VFQGMGIIHTAKKHVVDELVKKKRCRLIEKYRAQNRDITILPTRDDCTIRAEAEAEAKRL
NLNSVSLCFEAFEQDSAGNLLPLCEPVFSSSINNMKSALTGELKICRIDRHASSCVGGDE
VFILVEKVGKKNIKIKFFEVDDEDNEVWCDYGRFSELDVHHQYAIVFRTPPYRNLDIETP
VDVYIQLYRPTDGDCSEPIKFQYKPAERIAGRPTRKRQRSADTLSREMENNELNNYLSLS
KLMPAAPDSVLTGGHDPILSSGSGEFEKLCNEPAEHPLNSAEFREYLSNLSFSGDLTAYL
ANVGHSEVHDMAMDIALDGEASKPSVKRNTGRKGKSHGEKGRIHGTAKKLPKVDEVDQTR
PEAGEDSDGENHGMNKVTQKVVDVFGAMLKGKPLAREVTERIAGQLRKKSSEGIGPLHVA
IATGNLDPFKIMLSTLHEDEQPTIINDQNENGDTLLHVAVAYSRPAHVAELLRQGANANI
LNSSQESVLHLAIRQDSLECLRQLLLQENYPIASNRPELDKLNDDGETALHVAARSNKLA
AVELLVGAGASVNVQTQKQGNTALHIAVEQDNLQMVRFLVLEAKAEIDARNLAGNTPLHI
SCVVNDSGSVDICRFLMHNNADPYQANYIIEHQKQKQREEEGQAQGDPGPCPLELVAVKQ
EPLSDDELPPSPADDEDRRWTTQGQTSFDLASDKKEILDLLQRAEPPGARAESPSSLVVV
KQEPQDRAPSPVHDDERKLLLDEETNEKICAILDSKGLWKKLAELLDCSFLVPCIESSKS
PAATLFSYTGINGPAVSAHQLREHLASLGEEEGVLVIDEMFLIRRVKANLEKTS
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcactatgacactggctaatggcggtattgtaatgaatgagtttttttcgcca
ggcattagagacacgatgaacatcggcagccccagctcggtgtcgcagagctccgccgac
tcccaggactcgagcggagcgctccaatggctgaccccggtcgccacgacggcagtgtcc
ctgtcgccgctggagctgcacgccatgtcgttgaacgacatcgacgcgtctggcgcccca
cgcctggagatccgggaggagccgattgaaaagttccggttccggtacaagtcggagatg
ctgggcacgcacggcagcatcgtgggccgcaactcggagaagtaccggaagaagacgtac
cccaccgtcgaactggtgaactaccacgggacggccatcgtgcgctgctcgctgtacacg
gccgagctgcggcccgagaagcgctcgctgcacacgcaccgcctcgtcgtgaggcagggc
tcggaggacaaggacgaccctcacgacatcctcgtgtccccggaggtcggctacacggcc
gtgttccaaggcatgggcatcatccacactgccaagaaacacgtcgttgatgagctcgtc
aaaaagaagcggtgcagactcatagaaaaatacagagctcagaatcgagacataacgatt
ctgccgaccagagatgattgcactatccgtgcggaggctgaagccgaggccaagaggctg
aacctgaacagtgtgtctctgtgcttcgaggcgtttgagcaggactcggctggcaacctc
ctgccgctgtgcgagcccgtgttctccagctccatcaacaacatgaagagcgcgctgacg
ggcgagctgaagatctgtcgcatcgacaggcacgccagcagctgcgttggcggtgacgag
gtcttcattctcgtcgagaaggttggaaaaaaaaacatcaaaataaaattttttgaagtg
gacgacgaggacaacgaagtgtggtgcgactatggcaggttctcagagctagacgtgcat
catcagtatgccatagtgtttcgaacccctccgtatcgtaacctcgacatagagacgccg
gtcgatgtctacatacaactgtatcgaccgactgatggtgactgcagcgaacccatcaag
ttccagtacaagcctgctgaaaggatagcgggcagaccgacccgcaagcgccagcgctcg
gcggacaccctgtcccgggagatggagaacaacgagctgaacaactacctgagcctgagc
aagctgatgcccgccgcgccggactcggtcctcaccggcggccacgacccgatcctgtcc
agcggctcgggcgagttcgagaagctgtgcaacgagcccgccgagcacccgctcaactcg
gccgagttccgcgagtacctgagcaacctgtccttctcgggcgatctgaccgcgtacttg
gccaacgtgggtcactcggaggtgcacgacatggccatggacatagccctggacggagag
gccagcaagccgtccgtcaagcggaacaccggcaggaaagggaagtcccacggggaaaaa
ggcagaatacacggaaccgccaagaagctgccgaaagtggatgaagtggaccagactaga
ccggaagcgggggaagattcggatggcgagaaccatgggatgaacaaggtgacgcagaag
gtggtggatgtgttcggagccatgctgaaggggaagccactggccagggaagtcaccgag
aggatcgcgggccaactgcgcaagaagtccagcgaaggaatcgggcccctccacgtggcg
atcgcgacggggaatctggacccgttcaagatcatgctgagcacactgcatgaggacgag
cagccgaccataatcaacgaccagaacgagaatggagacacgctgctgcacgtggcggtg
gcgtacagccggccggcccacgtggcggagctgctgaggcagggagccaacgcgaacatc
ctgaactccagccaggagagcgtgctgcacctggccatcaggcaggacagtctcgagtgc
ctgagacaactgctgctccaggagaactaccccatcgcctcgaaccgcccggagctcgat
aagctcaacgacgacggcgagacggcgctgcacgtggcggcgcgcagcaacaagttggca
gcagtggagctgctggtgggagcgggggccagcgtcaacgtgcagacgcagaagcagggc
aacacggccttgcacatcgccgtggagcaggacaacctgcagatggtcaggttcctggtg
ctcgaggcgaaggcggagatcgacgcgaggaacttggccggcaacacgccgctccacatc
tcctgcgtcgtgaacgacagcggctccgtcgacatatgtcgcttcctcatgcataataac
gcggatccgtaccaggccaactacataatcgagcaccagaagcagaagcagcgggaggag
gaggggcaggcgcagggcgacccggggccgtgccccctggagctggtggctgtgaagcag
gagccgctgagcgacgacgagctgccgccctctcccgctgacgacgaggaccgtcgctgg
acgacccaggggcagacctccttcgaccttgcctccgacaagaaggagatcctggacctg
ctgcagcgggcagagcccccgggcgcgagggcagagtccccgtcgtcgctggtcgtcgtg
aagcaggagccccaggaccgtgcccccagccccgtccacgacgatgagagaaaactgctc
ttagacgaggaaacaaatgagaagatttgtgccattttggactccaaaggcctgtggaag
aagctagcagagctgctggactgcagtttcctggttccttgcatcgagtcttccaagagt
ccggccgccactctgttcagctacacaggcatcaacggcccggccgtgtcggcgcaccag
ctgcgcgagcacctggccagcctgggcgaggaagaaggcgtgctcgtcatcgacgagatg
tttctgatccgacgcgtcaaggccaacctggagaagacgagctag
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integrated database retrieval system
