Bacillus rossius redtenbacheri: 134529112
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Entry
134529112 CDS
T09888
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
bror
Bacillus rossius redtenbacheri
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
bror01009
]
134529112
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bror03019
]
134529112
04131 Membrane trafficking [BR:
bror04131
]
134529112
03036 Chromosome and associated proteins [BR:
bror03036
]
134529112
Enzymes [BR:
bror01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
134529112
Protein phosphatases and associated proteins [BR:
bror01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134529112
Messenger RNA biogenesis [BR:
bror03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
134529112
Membrane trafficking [BR:
bror04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
134529112
Chromosome and associated proteins [BR:
bror03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
134529112
BRITE hierarchy
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
134529112
NCBI-ProteinID:
XP_063218931
LinkDB
All DBs
Position
2:complement(13100845..13216852)
Genome browser
AA seq
832 aa
AA seq
DB search
MAASRLRKIARFETKNEPCIDLVKDPYEEIEKSLKTVRGGTGIVIESSVSSHECSWDVDH
PERSERLTTIIRRIKELGLIERCCVLTPRRAEKHEIVMCHSEDDYNSLQLASKIASVNFR
EHISSQFDSIFINNDTFDDALTAAGSAIDLVDAVWKGSIQNGIALVRPPGHHAVRDDFNG
YCFFNNVAVAAKHALLNLNVDRILIVDLDVHHGQGIQQTFYDEKRVLYFSMHRYEEGKFW
PNLRLSDYDHIGENKGRGYNWNVPLNRNAMTNGDYLAIFHHLLLPVAVEFSPELVIVSAG
YDAAYGCPEGEMLVTPSCYAHMVWSLMQLGNGKIALILEGGYCLKSLAEGAALSLRALLG
DPCPYLGPLPPPCSSIVETILNVITVQRPFWKCLKSYPSYVVKGNEVLDEGKHVMVEPKF
YGVTENVTSTFPTRACYPSQSIEQKNLFEKTLDEMISSTDLFVPPNNVCIAFDEIVLRHS
PLDSLRLEFELPGRVTQIMADLKVRGLYERCSHLKPRNVKLEELKAVHTKNYVDLMNSTK
YMGNEEIARVADDYESVYLCPYSVDSARAAAGAVLQVTDGVLSRQYRSGVAIVRPPGHHS
GCQTASGFCIFNNVAIAAKYAKSKFGLKRILILDWDVHHGNGTQEIFKSDPDVLYISLHR
YSVKFFPYSKEGNYDYVGEEEGGGFTVNIPWVEGKACDGQYVTAFHRVILPICYEFSPEL
VLVSAGFDALDGDPLGGCKVTPQCFAHLTHYLMALANGKVILCLEGGYNFQATSYGITSC
VKALLGDPLPSFDTKLALSKAACKTLQNVTNVHKQFWTSLAVNIPVPEILHS
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggctgctagtcgtttacggaaaattgcaagatttgaaaccaaaaacgaaccatgcatc
gatctggtgaaagatccctacgaagagatagaaaaaagtttgaaaactgttcgtggaggg
actggaatagtaattgaatcatctgtatcatcacatgaatgtagttgggatgtagaccat
cctgaacgttctgagaggctcacaaccataataagaaggatcaaggaactgggtcttatt
gaaaggtgctgcgtattgactccccgaagagcagaaaaacatgagattgtgatgtgccat
tcagaagacgattacaacagtcttcagcttgcaagcaaaattgccagtgtgaactttcgg
gagcatatctcttcacagtttgactctatatttataaataatgacacatttgatgatgcg
ctcactgcagctggaagtgcaatcgatcttgtagatgcagtttggaaaggttcaattcag
aatggaatcgccttagtcaggccacctgggcatcatgccgtgcgtgatgatttcaatgga
tattgcttcttcaacaatgttgcggttgcagcaaaacatgctcttttgaatctgaatgtg
gatagaatcttgattgtcgacttggatgttcaccatggccagggtatccagcagacgttc
tatgatgaaaaaagggtcctgtatttctccatgcatcgttacgaagaaggaaaattctgg
cctaatttgcgtctttcagattatgaccacataggagaaaacaaaggcaggggctataat
tggaatgtaccattaaatcggaatgccatgacaaatggagattacttggcaatctttcat
catctgttgcttcctgtggcagtggagttttcgcctgagctcgtgatcgtatctgcaggt
tatgacgctgcatatgggtgtcctgagggagaaatgctggtcactccgtcatgctatgct
cacatggtgtggtctctgatgcagcttggaaatgggaaaatagcactgattttagagggt
ggctattgtctgaagagcctggcagaaggtgcggccttgagcttgcgtgcacttctcggg
gatccgtgcccgtatttgggcccattgccaccaccttgttccagcatcgttgaaacaatc
cttaatgtcataactgtccaaagaccattttggaagtgtttgaaatcctaccccagttat
gttgtcaaaggaaatgaggttcttgatgaagggaaacatgtaatggtggaaccgaagttc
tatggagtgacagagaatgtgacttcaacatttccaacaagagcttgctacccttctcaa
agcattgaacagaaaaatctgtttgaaaagactttggatgaaatgatttcaagtacagat
ttgtttgttccaccaaataatgtgtgcattgcatttgatgaaattgttctgaggcatagt
cccctggatagtctaaggctggagttcgaactaccaggtcgtgttacgcagataatggcg
gatttgaaagtaaggggtttatatgaacgctgctctcatcttaagcctcgtaatgtgaaa
ttggaagagcttaaggcagttcacaccaaaaattacgttgatttgatgaacagcacaaag
tacatgggcaatgaagaaatcgcaagggttgctgacgactatgaatccgtgtacttgtgt
ccgtactccgtggattctgcgagggcagctgctggggcagttctgcaggttacggatggt
gtcctgagcagacagtatcgatcaggagttgccattgttaggcctcctgggcatcattca
ggatgtcagacagcatctggattttgcattttcaacaatgtggccatagctgcaaagtat
gccaaatccaagtttggattgaagagaatcttgattcttgattgggacgttcatcatggg
aatggaacgcaagagatttttaagtcagacccagatgtgttgtacatatctcttcatcga
tattctgtcaagttcttcccttattctaaagaagggaactatgattatgttggtgaagaa
gagggcggtggtttcactgtaaacatcccatgggttgaggggaaggcttgtgatggacag
tatgtaacagccttccatcgagtgattctgccaatatgttacgaattcagtccagagctg
gtgttggtgtctgcaggctttgatgccctggatggtgacccactcggaggctgcaaagtg
actccccagtgctttgctcacctcacgcactatctcatggccttggcaaatggcaaagtg
atcttgtgcttggaaggtggctacaactttcaagccacatcatacggcataacttcgtgt
gtcaaagcactgctcggagatcctttaccatccttcgataccaaacttgccttgtctaaa
gcagcatgtaaaacactgcagaatgttacaaatgtccataagcaattttggacaagtctt
gcagtcaacattcctgtaccagaaattttgcattcctaa
DBGET
integrated database retrieval system
