Bacillus rossius redtenbacheri: 134530087
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Entry
134530087 CDS
T09888
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134530087
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bror03041
]
134530087
03009 Ribosome biogenesis [BR:
bror03009
]
134530087
Enzymes [BR:
bror01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
134530087
Spliceosome [BR:
bror03041
]
Complex A
U2 snRNP components
U2 related factors
134530087
Complex B
134530087
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
134530087
Ribosome biogenesis [BR:
bror03009
]
Eukaryotic type
90S particles
Helicases
134530087
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
WHD_HA2
Helicase_C
DEAD
AAA_19
SRP54
nSTAND3
AAA_22
Flavi_DEAD
ResIII
Cas3-like_C_2
ABC_tran
AAA_25
AAA_7
nSTAND_NTPase5
ATPase
TsaE
Motif
Other DBs
NCBI-GeneID:
134530087
NCBI-ProteinID:
XP_063220739
LinkDB
All DBs
Position
3
Genome browser
AA seq
732 aa
AA seq
DB search
MSKRRIEVVDPYVKRKLVDNDKDKDKNKDREKEDRKLMSGIPLAAYPKPNMQVNPFTMLP
YTPRYQDFLRKRITLPVWEYRAQFMKLLEDHQSIVLVGETGSGKTTQIPQWCVEYSRSKG
KKGVACTQPRRVAAMSVAQRVSEEMDVCLGQEVGYSIRFEDCSSAKTLLKYMTDGMLLRE
GMSDPMLENYQVILLDEAHERTLATDILMGVLKEVIKQRTDLKLVIMSATLDAGKFQQYF
DNAPLMNVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEIMGDVLLFLTGQEEIEE
ACKRIKREIDNLGPEVGELKCIPLYSTLPPNLQQRIFEPAPPNKPNGAVGRKVVVSTNIA
ETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTKPGKCFRL
YTEKAFRQEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLN
YLAALDDDGNLTDLGAIMAEFPLDPQLAKMLIASCSHNCSNEILSITAMLSVPQCFVRPN
EAKKAADDAKMRFAHIDGDHLTLLNVYHAFKQNAEDPQWCYDNFVNYRSLKSGDNVRQQL
SRIMDRFNLRRTSTEFTSKDYYINIRKALVTGFFMQVAHLERTGHYLTIKDNQVVQLHPS
TCLDHKPEWVVYNEFVLTTKNYIRTVTDIKPEWLLKLSPQYYDLENFPQCEAKRQLELLQ
AKMETRQYQEGF
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacgtagaattgaagtcgttgacccctacgtgaaaagaaaattggttgacaat
gataaggacaaagataagaacaaagacagggagaaggaggaccggaagctgatgtccggc
atcccgctggctgcctaccccaagccgaacatgcaagtgaaccccttcacgatgctgccc
tacacgccacggtaccaggacttcctgcgcaagaggatcacgctgcccgtgtgggagtac
cgcgcccagttcatgaagctgctggaggaccaccagtccatcgtgctggtgggcgagacg
ggctcgggcaagaccacgcagatcccgcagtggtgcgtggagtactcccgctccaagggc
aagaagggcgtggcgtgcacgcagccgcgcagggtggcagccatgtcggtggcccagcgc
gtgtccgaggagatggacgtgtgcctggggcaggaggtcggctacagcatccgcttcgaa
gactgctcctccgccaagacactgctcaagtacatgacggacggcatgctgctgcgggag
ggcatgtccgaccccatgctggagaactaccaggtgatcctgctggacgaggcccacgag
cgcacgctggccacggacatcctcatgggcgtgctcaaggaggtcatcaagcagcgcacc
gacctcaagctcgtcatcatgtccgccaccctcgacgccggcaagttccagcaatacttc
gacaacgcgccgctcatgaacgtgccgggcagaacacacccggtggagatcttctacacg
ccggagccggagcgggactacctggaggccgccatacgcacggtcatccagatacacatg
tgcgaggagatcatgggcgacgtgctgctgttcctcaccggccaggaggaaatcgaggaa
gcctgcaagcgcatcaagagggaaatagacaacctgggcccggaagtgggtgagctgaag
tgcatccccctgtactcgacgctgccgcccaacttgcagcagaggatcttcgagccagcg
cctcccaacaaaccgaacggagccgtcggtcgcaaagtggtcgtgtccaccaacattgcg
gaaacctccttgacaatcgatggcgtggtgtttgtgatcgacccagggttcgcgaagcag
aaggtgtacaacccgcgcatccgcgtggagtcgctgctggtgtcgcccatcagcaaggcg
tcggcccagcagcgggcggggcgggcgggacgtaccaagccgggcaagtgcttccggctg
tacacggagaaggcgttccgccaggagatgcaggacaacacgtaccccgagatcctgcgc
tccaacctgggctccgtggtgctgcagctcaagaagctgggcatagacgacctggtgcac
ttcgacttcatggaccccccggcacccgagacgctgatgcgggcgctggagctgctgaac
tacctggcggcactggacgacgatgggaacctcaccgatctcggggccatcatggcagag
ttccctctcgacccacagctggccaagatgcttatagccagctgcagccacaactgctcc
aacgagatcctctccatcaccgccatgctgtcagtcccgcagtgctttgtgcggcccaac
gaggccaagaaggcagcagacgatgccaagatgaggtttgcacacatcgatggtgaccac
ctcaccttgctcaacgtctaccacgccttcaagcaaaacgcggaagacccacagtggtgt
tacgacaacttcgtgaactaccgctccctgaagtcgggcgataacgtgaggcagcagctg
tctcgaatcatggaccgcttcaacctgaggaggacgtcgacggagttcacctccaaggac
tattacataaacattcgcaaagcactcgtcactgggtttttcatgcaggtggcgcacctg
gagaggacggggcactacctcaccatcaaggacaaccaggtggtgcaactgcacccctcg
acgtgtctcgaccacaagcccgagtgggtcgtttacaacgagtttgtgctcaccaccaag
aactacattcgcaccgtcaccgacataaagccggagtggctgctgaagctgtcgccgcag
tactacgacctggagaacttcccgcagtgcgaggccaagagacagctggagctgctgcag
gccaagatggagacccggcagtaccaggagggcttctga
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integrated database retrieval system
