Bacillus rossius redtenbacheri: 134530139
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Entry
134530139 CDS
T09888
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134530139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bror03019
]
134530139
Messenger RNA biogenesis [BR:
bror03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
134530139
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
134530139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
134530139
NCBI-ProteinID:
XP_063220826
LinkDB
All DBs
Position
3:6739605..6797784
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AA seq
712 aa
AA seq
DB search
MAATRKLQGEIDRCLKKVTEGVETFEDIWQKVHNATNSNQKEKYEADLKKEIKKLQRLRD
QIKSWIASGEIKDKSTLLEYRKLIETQMERFKVVERETKTKAYSKEGLGAAQKLDPAQKE
RDEMAGWLTTSIDTLNVQLDQFECEIESLMAGKKKRLDKDKQDRVEELKAKVEKHGFHIR
KLETLLRMLDNMSVETSQIRRIKDDVEYYIESSQEPDFEENEYIYDDIVGLDEVELSGVG
LPSSATTDSNNSNDTGGTPTSTTSGNSPIPSPTLHNHSSDSSNEEKKKPKDDLPAKPLKP
TAVRASNSSSLIPTSNCSQMTLKPVLSASMPSKPASGPTLQSTPNNSSPSSGLSNHISNF
AAVAAANTQNSSASSKSTSHASENGPVPPCTPSTQPPSLLQLATSPPSGMVSSAATASAK
QLLQQQQSQLQLQQQQSQVNSLDNHHHHHNNTSSSSPPSSVSTAPSPVPGPGSPPPPAQT
AQPMLNGPIPALKQPPQQQVPEGMSSLKSIAQQVIDRAGLELPSDQGSRVLFDGGKMATM
PQPQQQTSEAHIPPLLGVAPLGPVPLQKEHQCEFQLLESAYFHMPHPSDSERLKAYLPRN
TCITPPYYPQVPLPHSDTLEFFQRLSTETLFFIFYYMEGTKAQYLAAKALKKQSWRFHTK
YMMWFQRHEEPKVINEEFEQGTYIYFDYEKWGQRKKEGFTFEYKYLEDRDLN
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggctgctacaagaaagctgcaaggtgaaattgaccggtgtctaaaaaaagtaaccgaa
ggggtggagacgtttgaagacatctggcagaaagtgcacaatgcgacgaacagtaatcaa
aaggagaagtatgaagccgacctcaagaaggaaatcaagaaacttcagaggttacgagat
caaattaagagctggattgcctcgggtgaaatcaaagataaaagtactttgttagagtac
agaaagttgattgagacgcaaatggaaaggttcaaagtggtggagagggaaactaagaca
aaggcgtactcgaaggagggtctgggagcggcacagaaactggacccggcgcagaaggag
cgggacgagatggcgggctggctcaccacgtccatagacacgctcaacgtacagctggac
cagtttgagtgcgagatcgagtcgctgatggcgggcaagaagaagcggctggacaaggac
aagcaggaccgggtggaggagctcaaggcgaaggtggagaagcacggcttccacatccgc
aagctggagacgctgctgaggatgctggacaacatgtccgtggagaccagccagataaga
agaataaaggatgacgtcgagtattacatagaatcgtcacaagagccggacttcgaggag
aatgaatacatttacgatgacattgttggtctggacgaagtcgaactctctggggttggc
ctgccgtcctctgcgacaacggacagcaacaacagcaacgacacgggaggcacgcccact
tcgacgacatccggcaactccccgattccttcccccaccctccacaaccattccagcgat
agttccaatgaagagaagaagaagcccaaagatgacctgccagccaagccgctgaagccg
accgccgtgagggcgagcaacagcagttcgctgatacccacgagtaactgctcccagatg
actctgaagcctgtcctcagtgcgagcatgccgagtaaacctgcatcaggtcccacgctg
cagtccacgcccaacaacagctcgcccagctcggggctcagcaaccacatcagcaacttc
gcggccgtggcggcggccaacacgcagaacagctccgcctccagcaagtcaacatctcac
gcgtcggagaacggtcccgttccaccctgcacgccttcgacgcagcccccctcgctgctg
cagctggcgacgtctcccccctccgggatggtctcgtccgccgcgaccgcctccgccaag
cagctcctgcagcagcagcagtcgcagttgcagctgcagcagcagcagtcgcaggtgaac
tccctggacaaccaccaccaccatcacaacaacaccagctcgtcgtcaccgccgtcgtcc
gtgagcacggccccctcgccggtcccggggcctggctcgccgccccctccggcgcagact
gcgcagcccatgctcaacgggccgattcccgccctcaagcagccgccgcaacagcaagtt
cctgaaggcatgtcgtcgctgaagtcgatagcccagcaagtgatagaccgggcggggctg
gagctgccgtcggaccagggctcccgggtgctgttcgacgggggcaagatggcaaccatg
ccccagccgcagcagcagacgtccgaggcgcacatccctcccctgctgggcgtggccccc
ctggggcccgtgccgctccagaaggagcaccagtgcgagttccagctcctggagagcgcg
tacttccacatgccgcatccatccgactcggagaggctcaaggcgtacctgccccgcaac
acctgcatcacgccgccgtactatcctcaggtcccactgccgcactcggacacgctggag
ttcttccagcggctctccacggagacgctgttcttcatcttctactacatggagggcacg
aaggctcagtacctggccgccaaggccctcaagaagcagagctggaggttccacaccaag
tacatgatgtggttccagcggcacgaggagcccaaggtcatcaacgaggagttcgaacag
ggaacatacatatactttgactacgagaagtggggccaacggaagaaggaaggctttacg
ttcgaatacaagtacttagaagaccgtgacttgaactga
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integrated database retrieval system
