Entry |
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Name |
(RefSeq) protein CLP1 homolog isoform X1
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KO |
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Organism |
bror Bacillus rossius redtenbacheri
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:bror00001]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134530223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:bror03019]
134530223
Enzymes [BR:bror01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
134530223
Messenger RNA biogenesis [BR:bror03019]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
134530223
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
3:complement(11866193..11887320)
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AA seq |
425 aa
MADDHEKDANTQEFKLDPDCELRFEVESKNEKITLELKSGMAEIFGTELVKGKNYVFTTG
AKIAVFTWQGCVVELRGKTDVSYVAKETPMVMYLNVHAALEQLRRSAEAGSTRGPITMVA
GPTDVGKSTVCRLLLNYAVRMGRRPIFVDLDVGQGQISIPGTIGALLVERPANVEEGFSQ
QAPLVYHYGHKNAGANTALYNMLVSRLSEVVSERMQANRKANASGVIINTCGWVKAEGYK
QLTHIAQAFEVDLIIVLDQERLYNELVRDMPTFVKVVFLPKSGGVVERSQYVRADSRDNR
VREYFYGLRTPLYPHSFDVWFSDTKIYKVGAPALPDSCMPLGMKAEDNMTKLVAVTPGPN
LLHHLLAVSFASSVEEDVITTNVAGFICVTNVDMERQCMTVLSPQLRPLPKTLLLLSEVQ
FMDSH |
NT seq |
1278 nt +upstreamnt +downstreamnt
atggcggatgatcatgagaaggatgcaaatacacaagaatttaaattagatcccgactgc
gagttacgatttgaggtcgaaagtaaaaatgaaaaaattacgctggagctgaagagtgga
atggctgaaatatttggcacagaactagtcaaaggaaaaaattatgtttttactacggga
gccaaaattgctgtattcacgtggcaaggatgtgtggtagagctgagggggaagacggat
gttagctatgttgcaaaggaaacaccaatggtgatgtacctcaacgtgcacgcggcgttg
gaacagctgcgacgcagcgcggaggcgggcagcacccggggccccatcaccatggtggcc
ggccccaccgatgtgggcaagtccaccgtctgccggctgctgctcaactacgccgtcagg
atgggccggcgacccatattcgtcgacctggacgtcggtcagggacagatctccataccg
ggaaccatcggggcgctgctggtggagaggccggccaacgtggaggagggcttctcgcag
caggccccgcttgtgtaccactacggccacaagaacgccggtgccaacacagctctctac
aacatgctggtgtctcgcctctcggaagtcgtctctgagaggatgcaagctaacagaaaa
gccaatgcgtccggagtgataatcaatacgtgcggctgggtgaaggcagagggctacaag
cagttgacgcacatcgctcaggcgtttgaggtggacctgatcatagtgctggaccaggag
aggctgtacaacgagctggtcagggacatgcccaccttcgtcaaggtcgtcttcctgcca
aagagcggcggtgtggtggagaggagtcagtacgtgcgtgcggactctcgcgacaaccgg
gtgcgggagtacttctacggcctgcgcaccccgctctacccccactccttcgacgtgtgg
ttcagcgacaccaagatatacaaagtgggagccccggcgttgcccgactcgtgcatgccg
ctcggcatgaaggcagaggacaacatgacaaagctggtggcggtcaccccgggtcctaat
cttcttcatcacctactcgcggtgagcttcgcatcatctgttgaagaagatgtcatcaca
acgaatgtggctggctttatttgtgtgacgaacgtggacatggagaggcagtgcatgacg
gtgctgtctccccagctgaggccgctaccaaagactctgctgctgctgtccgaggtgcag
ttcatggacagtcactag |