Bacillus rossius redtenbacheri: 134530339
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Entry
134530339 CDS
T09888
Name
(RefSeq) ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134530339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bror03019
]
134530339
03036 Chromosome and associated proteins [BR:
bror03036
]
134530339
Enzymes [BR:
bror01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
134530339
Messenger RNA biogenesis [BR:
bror03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
134530339
mRNA degradation factors
5'-3' decay
Decapping complex
134530339
Chromosome and associated proteins [BR:
bror03036
]
Eukaryotic type
Gene silencing
piRNA pathway
134530339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA
Motif
Other DBs
NCBI-GeneID:
134530339
NCBI-ProteinID:
XP_063221152
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All DBs
Position
3:complement(22994474..23045149)
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AA seq
446 aa
AA seq
DB search
MMMTETRITSSNHIINSINNQKVAEKVDDMGWKAKLKIPPKDKRMKTSDVTDTRGNEFEE
FCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYSIPVLEQVDP
KKDFIQALVIVPTRELALQTSQICIELAKHMEIRIMVTTGGTNLRDDIMRIYQKVQVIIA
TPGRILDLMDKNVANMDQCKILVLDEADKLLSQDFKGMLDHVISRLPKERQILLFSATFP
LTVKNFMDKHMRDPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFC
NSTQRVELLAKKITELGYCCYYIHAKMAQAHRNRVFHDFRAGLCRNLVCSDLFTRGIDVQ
AVNVVINFDFPKMAETYLHRIGRSGRFGHLGIAINLITYDDRFALHRIEQELGTEIKPIP
KVIDPSLYVSKAEDDAQGIEEGNVSK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgacagaaacgcgtatcacttcttctaatcacatcatcaacagtatcaacaat
cagaaagttgcagagaaagtcgatgatatgggatggaaggcgaaactgaaaattccaccc
aaggacaagcggatgaaaacaagtgatgtcacagatacaaggggcaatgagtttgaggag
ttttgtctgaagcgtgagctcctgatggggatcttcgagaaagggtgggagaagccctcg
cccatccaggaggctagcatacctattgctctctctgggaaagacgttctcgcccgtgca
aaaaacggtacgggtaaaacgggtgcctactctattccagttttggagcaggtggacccc
aaaaaagacttcattcaagcacttgtgattgtgccaacacgtgaattggctttgcaaact
agtcagatctgcatcgaacttgctaagcacatggaaattaggatcatggtgacaactggt
ggtacaaacctcagagatgacatcatgaggatttaccaaaaagttcaagtaatcattgct
acaccaggtcgcatcttggatctaatggacaagaatgttgcaaacatggatcagtgtaaa
attttagtgttagatgaggccgacaaacttctgtcacaagacttcaaaggaatgctggat
catgtaatttctagattacccaaagaaaggcaaatactgctcttctctgctacatttcct
ctcacagtgaagaatttcatggataagcacatgcgtgatccctatgaaatcaacttgatg
gaggagctgactttgaaaggagtcacgcagtactatgcatttgtacaggaacggcaaaag
gtccactgcctcaacactttgttttccaagttgcagataaaccagagtataatcttctgt
aactcgacacagcgggtggagttgctagcgaagaagatcactgagctgggctactgttgc
tactatatccatgccaagatggcacaggcacatcgcaacagggtgttccacgacttccgt
gctggcttgtgcaggaacttggtctgttcagatttgtttacaagaggaatagatgttcaa
gctgtcaatgtagtcatcaacttcgacttcccaaaaatggcagagacatacttgcacagg
attggcaggtcaggtcgctttggacaccttggaatagcgatcaatcttataacttacgat
gatcgcttcgcactgcaccgtattgaacaggagctgggcactgagataaagcccatccca
aaggtcatcgatccctctctgtacgtgtccaaagctgaggatgatgcccaaggaattgaa
gaagggaatgtcagcaagtaa
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