KEGG   Bacillus rossius redtenbacheri: 134530409
Entry
134530409         CDS       T09888                                 
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
bror  Bacillus rossius redtenbacheri
Pathway
bror04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:bror00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    134530409
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bror04121]
    134530409
Enzymes [BR:bror01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     134530409
Ubiquitin system [BR:bror04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    134530409
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     134530409
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EIPR1 Beta-prop_EML_2 EIF3I Beta-prop_RIG_2nd Beta-prop_TEP1_2nd WDR55 zf-C3HC4_2 Beta-prop_EML Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd zf-C3HC4 Beta-prop_WDR19_1st Beta-prop_DCAF4 Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 ANAPC4_WD40 zf-RING_2 Beta-prop_WDR35_TULP_N zf-C3HC4_3 zf-RING_UBOX Beta-prop_CAF1B_HIR1 WD40_like zf-C3HC4_4 RING_XB3-XBAT31 zf-RING_5 Beta-prop_DCAF12 WD40_RFWD3 zf-RING_10 zf-rbx1 Beta-prop_IFT140_1st WDR90_beta-prop_4th TRAF3_RING DUF6115 Rx_N zf-RING_6
Other DBs
NCBI-GeneID: 134530409
NCBI-ProteinID: XP_063221278
LinkDB
Position
3:complement(25771503..25773974)
AA seq 662 aa
MASGHGQSSCPASTSTTPQRIRPLKRQHPTVMNGVDSASEDKYFFCPICFDVIEAAHMTE
CGHTFCYGCITKSLETNGHCPKCNVAVDGMEHVYPNVLLNQLISEYKSRLLGIRDLKLKG
KIGDQIQGPADGLRNLVASKSQNLSLPDINLILEVLTQRKHLLEAESCVAQNKLLYEFLK
HLLQQKEEQLTQLTKEVELIKRDMEEVEGILRDVQNKCPKLDESIGPTTTSENVKKEAVA
STSCISDDLLKEQASSGDGASVYECSNEAQKNDITASFSTRRKRMHAHFDDFVQCYFSTR
SKELVFGCGDRATDNSRFSAGSGLDVFRENLVKFSRYNTLRPLATLNYSSDIFNSSTIVS
SIEFDKDNEFFAIAGVTKRIKVFDYGIVIRDAVDIHYPCVEMTSNSKISCISWNSYHKGT
LASSDYEGTVTVWDAVTGQRTKTFQEHEKRCWSVDFNDVDTRLIASGSDDARVKLWSLNI
EHSIATLEAKANVCCVKFNPQSSCHLAFGSADHCVHYYDLRIMKEALSVFKGHRKAVSYV
KFLNKEEIVSASTDSQLKMWNINNPHCLRSFVGHINEKNFVGLATDGDYVACGSENNALY
VYYKGLTKQLFNFKFEPVRSVVERERKEDDVNEFVSAVCWRQHSNVVVAANSQGIIKVLE
LV
NT seq 1989 nt   +upstreamnt  +downstreamnt
atggcatctgggcatggccaaagcagttgtcctgcatcaacttctactacccctcaacga
attagacctttgaagcgtcaacatccgacagtcatgaatggtgtggattctgcatctgaa
gacaagtattttttttgtcctatttgttttgatgtgatagaggcagcacacatgactgag
tgtggacatacattttgctatggctgtattactaagtctttggagacaaatggacattgc
cccaagtgcaacgttgctgttgatggaatggaacatgtttacccaaatgttttgctaaat
caattgatctcagaatataaatcacgtttactaggtattagagacttaaaattaaaagga
aaaattggtgatcagatacaaggtccagcagatggccttaggaatcttgtagcatcaaag
tctcaaaacttgtctctgcctgatattaacttgatcctagaggtgttaacacagaggaaa
catttattggaagcagagtcatgtgtggctcagaacaagctgttgtacgaatttctgaaa
catctactgcaacagaaagaggagcaattgacacagcttacaaaagaagtagagctgata
aagcgagacatggaggaggttgaaggaatactgcgagatgttcagaacaaatgtcctaaa
ctagatgagtctatagggcccaccacaacaagtgaaaatgtgaagaaagaggctgttgct
agtactagttgtatttctgatgatctgctgaaagagcaagctagtagtggcgatggagct
tctgtttatgaatgctcaaatgaagctcagaaaaatgacattactgcatcattttcgacc
agaagaaaacgaatgcatgcacactttgacgattttgttcagtgctacttttcaactcgt
tctaaggaattagtttttggttgtggagacagagccacggacaacagcaggttctctgca
ggctcagggttggatgtgttccgtgaaaatctggttaaattttctcgttacaacacttta
cgaccactggcaacgctcaactattctagtgatatattcaacagttctaccatagtgtcc
agcattgagtttgacaaggacaatgaattttttgcaattgctggtgtgactaagcgtatc
aaagtgtttgactatggtatcgtgattcgggatgcagttgacattcattacccatgtgtg
gagatgacctcaaattcaaagatatcatgcattagctggaactcttatcataaaggaaca
ttagccagtagcgattacgagggcactgtcacggtgtgggatgcggtcacgggccagagg
acaaagactttccaggaacatgagaaacgttgttggagtgtggattttaacgatgtggat
acacggctcatagcgtctggatctgacgatgctagagttaaattatggtccctcaacata
gaacactccattgcaacattagaggcaaaggctaacgtatgttgtgtgaaatttaatcca
caaagctcttgccacttggcgtttggttctgcagaccattgcgtacactactatgatctg
cgaatcatgaaggaagcactttctgtcttcaagggccatcgaaaggccgtttcatacgtc
aagttcctcaacaaggaagaaatagtgtccgcctcgacggacagccaactgaagatgtgg
aacatcaacaatccacactgtctgcgatcctttgttggtcacatcaacgagaagaacttt
gtggggctggcgacagacggggactacgtggcttgcgggtcggagaacaacgcactttat
gtatactacaagggcctgaccaagcagctgtttaacttcaagttcgagccggttaggagt
gtggtggaacgggagaggaaggaagatgacgtgaacgaatttgtgtctgcggtttgctgg
cgtcagcattctaatgttgtcgttgctgcaaatagccaaggaattattaaagttttggaa
ttggtgtaa

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