Bacillus rossius redtenbacheri: 134530868
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Entry
134530868 CDS
T09888
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134530868
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bror03019
]
134530868
Messenger RNA biogenesis [BR:
bror03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
134530868
mRNA degradation factors
5'-3' decay
Lsm complex
134530868
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
134530868
NCBI-ProteinID:
XP_063222202
LinkDB
All DBs
Position
3:69815195..69847202
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AA seq
134 aa
AA seq
DB search
MSFLPGTASLLDELDKKLMVLLRDGRTLIGYLRSVDQFANLVLHRTIERIHVGNEFGDIQ
RGVFIVRGENVVLLGEIDDERDAGSRLVEVSVEDILDAQRREQEARQEREKRLAKALKER
GLTYLPDLTHDDLF
NT seq
405 nt
NT seq
+upstream
nt +downstream
nt
atgagcttcttgccaggaactgcttccttgttggacgaattggacaagaagcttatggtg
ttgctgcgagatggccgaaccctcattggctacctgcgcagcgtggaccagtttgccaac
ctcgtgctgcaccgcaccatagagcggatccacgtgggcaatgagtttggcgacatccag
cgcggagtgttcatcgtgcgtggcgagaacgttgtgctgctgggggaaatcgacgacgag
cgggacgcgggctcgcggctggtggaggtgtccgtggaggacatcctggacgctcagcgc
cgcgagcaggaggcgcggcaggagcgggagaagcgcctggccaaggccctcaaggagcgc
ggcctcacctacctgcccgacctcacgcacgatgacctcttctga
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