Bacillus rossius redtenbacheri: 134530916
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Entry
134530916 CDS
T09888
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134530916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bror03041
]
134530916
Spliceosome [BR:
bror03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
134530916
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
PRP4
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_SCAP
Ge1_WD40
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
WD40_like
Beta-prop_SPT8
WD_LRWD1
Beta-prop_WDR75_2nd
Nbas_N
Motif
Other DBs
NCBI-GeneID:
134530916
NCBI-ProteinID:
XP_063222299
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Position
3:75265906..75331891
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AA seq
513 aa
AA seq
DB search
MSDDDDFIYIKKQNTVHYGSLEEQERARLAAIAAGEKDVDGLPATVTSGADMAGHINISD
EYMELEEEMHRDRQALLEEFERRKRARQINVSTDDEEVKKNLRQLGEPICLFGEGPADRR
SRLRDLLAKLGEDAIKKKQEEEEERIQQEKDQESTWYHEGPESLRVSRLWIAKYSLPRAK
LRLEKSRLERQQPEATRTAHRQELQKKLQATTIFCSQIGDNRPISFCQFSPDSKMLATAS
WSGHCRLWNIPNCDPVMNLQGHNCNVGAIVWHPHAMANENERVCALASCAFDGSVKLWNL
SSSDPLADVEGHAPHRVSRLAFHPSGRFLGTCCFDSSWRLWDLEQGEEVLHQEGHCKPVY
CISFQDDGAVCATGGLDAFARVWDLRTGRCIMFMEGHLKAVYGVDFSPNGYHIATGSEDN
MCKIWDLRRRTCLYTIPAHMNLISNVRYQREGGHFIVTSSYDNTVKVWSNKTWQPLKTLS
GHDGKVMCVDISPDSQYIATSSYDRTFKLWAPE
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgatgatgacttcatctacatcaagaagcagaacacagtgcattatgggtcc
ctggaggagcaggagagagctagattggctgcgattgcagccggtgaaaaggatgtcgat
ggcctcccggccacagtcacgtctggcgctgatatggctggacacatcaatatctcggat
gaatacatggagctggaggaagagatgcacagagacaggcaggccttgctggaggagttt
gagaggcgcaagcgtgcacgtcagataaacgtgtccaccgatgacgaggaggtgaagaag
aacctgcggcagctcggggagccaatctgcttgttcggggaaggaccagcagacagacgc
agtcgactcagggatctgctggccaaattaggtgaggatgccataaagaaaaagcaagaa
gaagaggaagagaggatacagcaggaaaaagatcaggagtcgacttggtaccacgaggga
ccagagtctcttcgtgtttcaagactgtggatagcaaagtactcgttgccacgggcgaaa
ctccgcttggagaagtctcgcctggagaggcagcagccagaggccacgaggacggcccac
cggcaggagctgcagaagaagctgcaggccacgaccatcttctgcagtcagatcggggac
aacaggccaatctccttctgccagttcagcccagactcaaagatgctcgccactgcttct
tggagtggccactgccgactttggaacatcccaaactgtgaccccgtgatgaatctgcag
ggtcacaactgcaacgtgggggccattgtgtggcatcctcatgccatggcgaacgaaaac
gagcgggtttgtgccttggcctcttgcgcgttcgacggctctgtcaagctgtggaacttg
agcagctccgatccgctggcggacgtggagggccacgccccgcacagggtgtcgcggctc
gcgttccacccctcgggccgtttcctgggaacgtgctgcttcgactcctcttggcggctg
tgggacctggagcagggtgaggaggtgctgcatcaggaggggcactgcaagcccgtgtac
tgcatctccttccaggacgacggcgccgtgtgcgccacgggtggtttggatgcttttgcc
cgtgtgtgggacttgcgtactgggcgttgcatcatgttcatggagggccacttgaaggct
gtttatggggtagatttctccccaaatgggtaccacatagccacgggaagtgaagacaac
atgtgcaagatatgggacctgcgaagacggacgtgtttgtacacaattccggctcacatg
aatctgatctcaaatgtcagataccagcgtgagggtggtcatttcatcgtcacgtcttcg
tatgacaacacagtgaaggtgtggtccaacaagacatggcagccgttgaaaactctatct
ggacatgatggaaaagtgatgtgtgtggatatctctccagattctcagtacatcgcaaca
tcatcgtacgacagaacgttcaagctgtgggctcctgaataa
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