Bacillus rossius redtenbacheri: 134531001
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Entry
134531001 CDS
T09888
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
bror
Bacillus rossius redtenbacheri
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bror03021
]
134531001
03036 Chromosome and associated proteins [BR:
bror03036
]
134531001
Transcription machinery [BR:
bror03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
134531001
Chromosome and associated proteins [BR:
bror03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
134531001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
SH2
S1
Tex_central_region
HHH_3
HHH_9
Spt6_S1
S1_RRP5
Tex_YqgF
Tex_N
OB_RRP5_4th
HTH_10
Motif
Other DBs
NCBI-GeneID:
134531001
NCBI-ProteinID:
XP_063222494
LinkDB
All DBs
Position
1:1625357..1686462
Genome browser
AA seq
1778 aa
AA seq
DB search
MADFLDSEAEESEEEEEEEDEEEGGYKTKKKKKKGKKVRAVDSDDEEEEDDEERLREELK
DLIDDAPIDESDGEDSDASRGSRKRKKSDDEEFDDRLEDEDYDLLEENLGVKVERNRFKR
LRRIQDEESEDEQEDHVEGERDAIANELFDEGSEHEREELDEDHVSDRGRAEVEHYDDEE
EEGELSDADDFIVDDDGRPITDKKKKRKPIFTDAALQEAQDIFGVDFDYEEFEKYDDEFD
EEEEEDDEYDVEEGDEDVEKRRKPKKAAKKKPTRKSIFEIYEPSELKRGHFTDLDNEIRN
TDIPERMQLRDFPVTAVPDGSDELDEESEWIYKQAFCKPSISLQDGHGEGRDRSKKGPQT
IAKIKKALEFMRNQHFEVPFIAFYRKEYVQPELNINDLWKVYKFDEKWCQLRSRKESLTT
LFERMRDYQAEELMKNVDAPIPDHVRILRDEDIERLRLVQTAEELRDVHHHFLLHYAQDV
APMNAAWRAKERERAREARARRRARPEGEDGDEGDEPPEEDAEEPPEEPRDAETVKKAVA
SGPYAMCRKAKLDGFAKRFGLTPEQFGENLRDNYQRHEVEQEPCAPDEVAPEYVSSKFSE
VGDVLKAAKFMVAVQLARDPLVRKCTREAFFERAKIDVQPTKKGMKEIDENHPCYSMKYL
KGKPVRDLVGDQYLKLVLAEQDGLIQLSFSDHIEGLTSHSYTEEAKQLYMRDEFSKNVQE
WNNLRGECVELALARLLLPDLKKELRSCLLAEAREFVLRNCCRKLYSWLKVAPYSVEFAE
EDEEEWDASKGLRVMGVAYVPDFSQAAFTCLVGPQGDCTDHLRLPNLLKRKNTFREDEKL
EKEADLSALRSFISSKRPHVIVVGGESREALMVAADLKEIVAQLVEDDQFPSIAVEVIDN
ELAKVYANSIKGENDYREFPHLLRQAISLARRMQDPLVEFSQLCSSDEEILCLRYHPLQD
QLGREELLEALYLELVNRTNEVGVDVNLAVQEPYTANLVQFVCGLGPRKAQALLKTLKQS
NQRLENRTQLVTSCHMGPKVFINCAGFVRIDTNSLGDSTEAYVEVLDGSRVHPETYEWAR
KMAVDALEYDDEDANPAGALEEILESPERLKDLDLDAFAEELERQGFGNKSITLYDIRSE
LNHRYKDLRSPYVSANAEQMFDLLTKETPETFFIGKMVLATVIGVTHRKPQGDQLDQANP
VRNDETGLWQCPFCLKNDFPELSEVWNHFDAGGCPGKATGVRVRLDNGVSGYVHVKNLSD
KRVNNPEERVYRGQIIHCRIIKIDVERFSVECTSKSSDLLDKKHEWRPPKDPYYDLEAEE
RDISAEEEAKKTKQRQTYIKRVIVHPSFHNISFQEAEKLMSQMDQGEVVIRPSSKGSDHL
TVTWKVTDGVYQHIDVREEGKANAFSLGQSLWIGNEEFEDLDEIIARHVNPMAAHARDLL
SFKYYRETEGLKDKAEEFLKDEKKKNASKIHYVLAASKNYPGKFMLSYLPRARCRHEFIT
VTPEGFRFRQQLFDSLGSLFRWFKEHFRDPVPGTPSTPRNMATNRTPYQTPGLNIAGMNQ
EAIQRVAQNLPSHMLHSLSQVASRTPHYPHTPGGYGASLHGYPNTPYTPSGQTPFMTPYH
TPHSSQTPRYGQQTPSHPGPFLHPGSLTPAHRTPSHRSAGATPQRPAVASMPAEPMDWGK
AAEAWAKLKNHEQNSPRMDGRATPRSHSSGSTPGQDARRTTPRYEDPPRGVFPAARASPY
GFKSPGRDSLRSTPLTNASPQSMVESSLGDATPLYDEN
NT seq
5337 nt
NT seq
+upstream
nt +downstream
nt
atggccgactttttggactctgaggcagaagagagtgaggaggaggaggaggaggaggat
gaggaagaggggggctacaagaccaagaagaagaagaagaagggcaagaaggtccgggca
gtggacagcgatgacgaggaagaggaagatgacgaggagcggctgcgggaggagctcaag
gacctgatagacgacgcccccatcgacgagagcgacggggaggactcggacgcctcgcgc
ggctcccgcaagcgcaagaagagcgacgacgaggagttcgacgaccgcctggaggacgag
gactacgacctgctggaggagaacctgggcgtgaaggtcgagaggaaccgcttcaagagg
ctgcggaggatccaggacgaggagtctgaggacgagcaggaggaccacgtcgaaggagag
cgcgacgcgatcgccaacgaactgttcgacgagggctcggagcacgaaagagaagagctg
gacgaggaccacgtctcggacagaggccgcgcggaggtggagcactacgacgacgaagag
gaggagggggagctgtccgacgcagacgacttcatcgtggatgacgacggacgccccatt
acggacaagaagaagaagcggaaaccaatcttcacggatgcggctcttcaagaagctcag
gacatattcggtgtggacttcgactacgaagagtttgagaagtacgacgatgagtttgat
gaagaagaggaagaagatgacgaatatgatgtggaagagggcgatgaagacgtggagaag
agacggaagccgaagaaagcagcgaagaagaaaccaaccaggaagtcgatattcgagatc
tacgagccgagcgagttaaagcggggccacttcacagatcttgacaacgagatccgcaac
acggacatcccggagcgcatgcagctgcgggacttcccggtgacggcggtgcccgacggc
tcggacgagctggacgaggagtcggagtggatctacaagcaggcgttctgcaagcccagc
atctcgctccaggacgggcacggggaaggcagggacaggtccaagaagggaccccagacg
atcgccaagatcaagaaggcgctggagttcatgaggaaccagcatttcgaggtgccgttc
atcgcgttctaccggaaggagtacgtgcaaccggagctgaacatcaatgacctgtggaag
gtctacaagttcgacgagaagtggtgccaactgcggtccagaaaggagagtctcacgacc
ctgttcgagaggatgcgagactaccaggcggaggagctgatgaagaacgtcgatgccccg
ataccggaccacgtgcgcatcctccgggacgaggacatagagaggctcaggctggtgcag
acggcggaggagctcagggacgtgcaccaccacttcctgctgcactacgcccaggacgtg
gcgcccatgaacgcggcgtggcgcgccaaggagcgcgagcgggcgcgggaggcccgggcc
aggcgccgggcgcggccggagggcgaggacggcgacgagggcgacgagcccccggaggag
gacgcggaggagccgcccgaggagccccgggacgcggagacggtgaagaaggccgtcgcc
agcggtccctacgccatgtgtcgcaaggccaagctggacggcttcgccaagaggtttggc
ctgacgccggagcagttcggcgagaacctgcgagacaactaccagcgccacgaagtggag
caggagccctgcgccccggacgaggtcgccccggaatacgtcagcagcaagttcagcgag
gtgggggacgtgctgaaggctgccaagttcatggtggccgtgcagctggcgcgcgacccg
ctggtcaggaagtgcacgcgcgaggccttcttcgagcgagccaagatcgacgtgcagccc
accaagaagggaatgaaggagatcgacgagaaccacccgtgctacagcatgaagtacctg
aagggcaagccggtgcgggacctggtgggcgaccagtacctgaagctggtcctggccgag
caggacggcctgatccagctgagcttcagcgaccacatcgagggcctcacttcgcactcc
tacaccgaggaggccaagcagctctacatgagggacgagttcagcaagaacgtgcaggag
tggaacaacctgcggggggagtgcgtggagctcgcgctcgcccgcctgctgctgcccgac
ctcaagaaggagctgcgcagctgtctgctggccgaggcccgggagttcgtgctcaggaac
tgctgtcgcaagctctacagctggctcaaggtggcgccctactccgtggagtttgcggag
gaggacgaggaggagtgggacgccagcaagggcctgcgcgtgatgggcgtggcgtacgtg
cccgacttctcgcaggccgcattcacgtgcctggtggggccgcagggcgactgcacggac
cacctgcgcctgcccaacctgctcaagaggaagaacaccttccgcgaggatgagaagctc
gagaaggaagcagacctgtcggcgctgcgcagctttatcagctcgaagcggccgcacgtg
atcgtggtgggcggggagtcgcgggaggccctcatggtggccgccgacctcaaggagata
gtggctcagctggtggaggacgaccagttcccgtccatcgccgtggaggtcatcgacaac
gagctggccaaggtctacgccaactccatcaagggagagaatgactaccgcgagttcccg
cacttactgcgacaagccatctcgctggcccggaggatgcaggacccgctggtggagttc
tcgcagctgtgctcgtccgacgaggagatcctgtgtctgcgctaccaccccctccaggac
cagctcgggcgggaggagctgctggaggccctgtacctggagctggtgaaccgcaccaac
gaggtgggcgtggacgtgaacctggccgtgcaggagccctacacggccaacctggtgcag
ttcgtgtgcggcctggggcccaggaaggcccaggcgctgctcaagacgctgaagcagagc
aaccagcgcctggagaaccgcacccagctggtcacgtcctgccacatgggccccaaggtg
ttcatcaactgcgccggcttcgtgcgcatcgacaccaactccctgggcgacagcaccgag
gcgtacgtggaggtcctggacgggtcccgggtgcaccccgagacgtacgagtgggctcgc
aagatggcggtggatgccctggagtacgacgacgaggatgccaacccggcaggcgcgctg
gaggagatcctggagtctccggagagactgaaggacttggacctggacgccttcgcggag
gagctggagcgccaggggttcggcaacaagagcatcaccttgtacgacattcgctccgag
ctcaaccacagatacaaagatctacgaagtccgtatgtgtctgccaacgcggagcagatg
ttcgatctgttaacgaaagaaacaccggaaacattcttcattggcaagatggtgttggca
acagtcattggtgtgacccacaggaagccacagggcgaccagctggaccaggccaacccc
gtgaggaacgacgagacggggctctggcagtgccctttctgcctcaagaacgacttccca
gagttgtccgaggtgtggaaccacttcgacgcgggcggctgcccgggaaaggcgacgggc
gtgcgggtacgcctcgacaacggcgtgtcgggctacgtccacgtcaagaacctgtcggac
aagcgcgtcaacaacccggaagagagggtgtaccgtggccagatcatccactgtcgcatc
atcaagatcgacgtggagcgcttctcggtcgaatgcacgtccaagagctcggacctgctc
gacaagaagcacgagtggaggccgcccaaggacccgtactacgacctcgaggcggaggag
cgggacatcagcgccgaggaggaggccaagaaaaccaagcagcgccagacgtacatcaag
cgcgtcatcgtgcacccgtcgttccacaacatctccttccaggaggcggagaagctcatg
tcgcagatggaccagggcgaggtggtcatccgcccgtccagcaagggctcggaccacctg
acggtgacgtggaaggtgacggacggcgtgtaccagcacatcgacgtgcgggaagagggc
aaggccaacgccttcagcctgggccagtcgctgtggatcgggaacgaggagttcgaggac
ctggatgagatcatcgcccgccacgtgaaccccatggcggcccacgcccgggacctgctg
tccttcaagtactaccgggagaccgaggggctcaaggacaaggctgaggagttcctgaag
gacgagaagaagaaaaatgcttccaaaattcattacgtccttgctgcctcaaagaactac
ccgggcaagttcatgctgtcgtacctgccgagggcacgctgccgccacgagttcatcacc
gtgacgccggagggcttccgcttccgccagcagctgttcgactcgctgggctcgctgttc
cgctggttcaaggagcacttccgggacccggtgccgggcacgcccagcacgccgcgcaac
atggctaccaaccgcacgccctaccagacgcccggcctcaacatcgcgggcatgaaccag
gaggccatccagcgcgtggcccagaacctgcccagccacatgctgcacagcctgtcgcag
gtggccagccgcaccccccactacccgcacacgccgggcggctacggcgccagcctgcac
ggctaccccaacacgccgtacacaccgtctggccagacgccgttcatgacgccgtaccac
accccccactcgtcgcagacgccgcggtacggccagcagaccccgtcccacccgggcccc
ttcctgcaccccgggtcgctgacgcccgcccacaggacgccgtcgcaccgctcggccggc
gccacgccccagaggcctgccgtcgccagcatgcccgccgagcccatggactggggcaag
gcggccgaggcgtgggccaagctcaagaaccacgagcagaactcccccaggatggacggg
cgcgccacgccccggtctcacagctccggctccacgcccggccaggacgcgcgcaggacg
acgccgcgctacgaggacccgccccgcggagtgttccccgcggcacgggcctccccgtac
ggcttcaagtcgcccgggcgggacagcctgcgctccacgccgctcaccaacgccagcccc
cagtccatggtggagagctcgctgggcgacgccacgcctctgtacgacgagaactga
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