Bacillus rossius redtenbacheri: 134531216
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Entry
134531216 CDS
T09888
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 6 isoform X1
KO
K14398
cleavage and polyadenylation specificity factor subunit 6/7
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03015
mRNA surveillance pathway
bror03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134531216
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
134531216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bror03019
]
134531216
Messenger RNA biogenesis [BR:
bror03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
134531216
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSLD_CPSF6
RRM_1
ALK_LTK_GRD
Motif
Other DBs
NCBI-GeneID:
134531216
NCBI-ProteinID:
XP_063222945
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All DBs
Position
3:complement(123024463..123319461)
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AA seq
738 aa
AA seq
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MADGVDIDLYADDIEQDFGQAVIKEEFAGDGIDLYDDVIAAPPGGGGGGDDNSQPAHAPG
GTLPSQDGHSPSSNNPPYHQMGNNIQPNQVGRRHQLYVGNLTWWTTDQDITEAVIAIGVN
DFMEVKFFENRANGQSKGFCVVTLGSESSMRMCMDRLPKKELHGQNPVVTFPTKQALNQF
EAQSKTRPAPPPNPGPRNPHPHSHQQRMMMGPPQGMRPRMPPPGMPPPGPGQRMPGPPMH
QGPPGHGHPGSGPPQQGHPPPGFQHNNWNGPRANGPPRPGPPPQGPPHPQGPQTRPPPGM
QFQGPPPGQGPPRGPPPGSLPPDPRGPPPRPEWSRPPGPTGMSHHHPGAPGFPPHSQPPP
MQGPPPGQQGPPRGPPPPGPGGPPPPGHTGPPVQGPPAPHVNPAFFQQSGPPHQGPPPPH
APPHGYGPPPTSQVRGWPTTAPPQYGAPPPEHRVEGPPPISEVEFEEIMSRNRTVSSSAI
ARAVSDAAAGEYASAIETLVTAISLIKQSKVANDDRCKILISSLQDTLHGVETKSYGSSR
RERSRSRDRSERSHRRRRERSRSRDREYRERSRDRDRERERERERERDRYYADAYPRERS
RSRDREREREYRERSREDSRRATEVATVDSSSVYSSSARQAVRPRVKSPEPPEPAAVITS
KSSQEAQRVPYSNHDHRSVADTQTSPHARYYDDRYREREREREREREATRRDPERERERE
RERERREERESSHRSSRH
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggcgtagatattgatttatatgccgatgatattgagcaagattttggtcag
gcggtgatcaaggaagagtttgcgggtgatggcatcgacctgtatgacgacgtgattgcg
gcgccgcccgggggcggtggtgggggggacgacaactcccagccggcgcacgctccgggc
gggactctgcccagccaggatggccactctccgagcagtaacaatcccccgtaccaccag
atgggcaacaacatccagcccaaccaggttggccggcgacaccagctctacgtcggcaac
ctcacctggtggaccacagaccaggacatcacggaggcagtgatcgcaataggggtgaat
gacttcatggaggtgaagttctttgagaaccgagccaacggccagtcgaagggcttctgc
gtggtgacgctggggtcggagtcgagcatgcgcatgtgcatggaccgtcttccgaagaag
gagctccacgggcagaaccctgtcgtcacattccccaccaagcaggccctcaaccagttc
gaggcgcagtcgaagacacggcctgcgccgccacccaacccgggccccaggaaccctcac
ccacactcgcaccagcagcgcatgatgatgggccctcctcagggcatgcgacccaggatg
ccgccccccggcatgccgcccccgggacccggccagcgcatgcccggcccgcccatgcac
caaggccccccgggccacggccacccgggctccggccccccgcaacagggccatcccccg
cccggcttccagcacaacaactggaacggccccagggccaacggtccgccccggccaggc
cccccgccccagggtccgccgcacccccagggtccgcagacacgccctccgccgggcatg
cagttccagggaccaccgccaggccaggggccgccgcgggggccgccccctggcagtctg
ccccctgacccgagagggcccccacccagacccgagtggagccgccctcctggaccaaca
ggcatgagtcaccaccaccctggagcgcctgggttccccccacacagccagcccccgccc
atgcagggccctccgccaggacagcaggggcctccccgcggccccccgccaccaggacct
ggcgggcccccacccccagggcacacaggcccccccgtgcagggtcccccggccccccat
gtcaaccctgccttcttccagcagtcgggcccgccccaccagggccctcctccccctcat
gccccccctcatggctatggtcctccgcctacttcccaggtacgcggctggccaaccaca
gcccccccgcagtacggtgctcctccaccggagcatcgcgtggagggaccgcctcccatc
agcgaggtggagttcgaggagatcatgagccgcaaccgcaccgtatccagttctgccatc
gcccgagcagtgtcagacgcagcggctggcgagtacgcgagtgcgatagagaccctggtg
accgccatctccctcatcaagcagtctaaagtggccaacgatgaccgctgcaagatcctc
atcagttctcttcaggacaccctgcacggtgtggaaacaaagagctacggctcgtcacgg
agagagaggtctcggtcgcgggaccgctccgagaggtcgcaccgccgtcgcagagagcgg
tctcgcagcagagaccgcgagtacagagagcgcagccgtgaccgagatcgcgagcgcgag
agggagcgagagcgtgaacgtgatcgctactacgctgacgcctaccctcgtgagaggtct
cgcagccgcgacagagagagagagagagagtatcgtgagcgtagcagagaagacagtcga
cgtgctactgaagtcgccactgttgacagttccagtgtgtactcaagctccgcacgtcaa
gccgtgcgccctcgcgtaaagtctccagaaccaccggaaccagcggctgtcattacctcg
aagtccagtcaggaggcgcagcgcgtaccctactccaaccacgatcatcgctcagtagca
gacactcaaacaagtccgcacgcaaggtactatgatgatagataccgagaacgtgagcgg
gagagagaacgagagagggaagccactcgccgtgacccagaacgagagcgcgagagggag
cgagagagagagcgcagagaggagcgagaatcatctcaccgtagctctcgacactaa
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