Bacillus rossius redtenbacheri: 134531483
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Entry
134531483 CDS
T09888
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03022
Basal transcription factors
bror03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
134531483
09124 Replication and repair
03420 Nucleotide excision repair
134531483
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bror03021
]
134531483
03036 Chromosome and associated proteins [BR:
bror03036
]
134531483
03400 DNA repair and recombination proteins [BR:
bror03400
]
134531483
Enzymes [BR:
bror01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
134531483
Transcription machinery [BR:
bror03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
134531483
Chromosome and associated proteins [BR:
bror03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
134531483
DNA repair and recombination proteins [BR:
bror03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
134531483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
DEAD
ResIII
nSTAND3
AAA_11
PspAA
Motif
Other DBs
NCBI-GeneID:
134531483
NCBI-ProteinID:
XP_063223266
LinkDB
All DBs
Position
1:5759740..5809448
Genome browser
AA seq
759 aa
AA seq
DB search
MKFAVDGLLVYFPYDYIYPEQYAYMLELKRALDARGHCLLEMPSGTGKTVSLLSLIVAYM
LANPGDVSKLIYCSRTVPEIEKVIEELKKLLAYYEAEGEPTAMLGLVLSSRKNLCIHPQV
SKEREGKVVDGRCHALTASYVRERHRGDSSVPVCDFYEGFDLEGRECPLPAGVYSLDDIK
DFGYARSWCPYFLARYSIMHASVVVYSYHYLLDPKIAEVVSKELSKSSVVVFDEAHNIDN
VCIDSMSVKINRRTIEKSSANLQVLEKTVSEMKEDDANKLREEYQRLVDGLRDASVARET
DVVLSNPVLPDEVLQEAVPGNIRTAEHFVAFLKRFVEYLKMRLRVQHVVQESPAGFLRDV
AHKICIERKPLRFCAERLASLLRTLQISDLTDFSPLTLITHLATLVSTYTKGFTIIVEPF
DDKTPTVANPVLHFSCLDSSIAIKPVFERFQTVVITSGTLSPLDMYPKILDFHPVIMSSF
TMTLARPCLLPMIVSKGNDQVAISSRFETREDVAVVRNYGQLLVEVASAVPDGVVCFFTS
YMYLESVVASWYDQGVVDSLQRCKLLFIETQDSAETSLALLNYIKACESGRGAVLLSVAR
GKVSEGVDFDHHLGRAVLMFGIPYVYTQSRILRARLDYLRDQFQIRENDFLTFDAMRHAA
QCVGRAIRGKTDYGIMIFADKRFSRADKRSKLPKWIQEHLKDSYCNLSTEEAVQILKRWL
RQMAQPFSREDQLGLSLLTYEQLQSEEMQKKLQKAAEQL
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttgctgtggacggcttgctggtgtacttcccgtacgactacatctaccccgag
cagtatgcctacatgctggagctgaagagagccctggacgcccggggccactgcctgctg
gagatgccgtccggcacgggcaagacggtgtcgctgctgtcgctcatcgtggcgtacatg
ctggccaacccgggggacgtgagcaagctgatctactgctctcgcaccgtgccagagatc
gagaaggtcatcgaggagctgaagaagctgctggcgtactacgaggcggagggcgagccc
accgccatgctggggctggtgctgagctctcgcaagaacctctgcatccaccctcaggtg
agcaaggagcgcgagggcaaggtggtggacggccgctgccacgccctcacggcctcctac
gtgcgcgagcggcaccgtggcgacagctccgtgccggtctgcgacttctacgagggcttc
gacctggaggggcgggagtgccccctgcccgccggcgtgtacagcctcgacgacatcaag
gacttcggctacgccaggagctggtgcccctacttcctggcgcgctactcgatcatgcat
gcgagtgtggtggtgtacagctaccactacctgctggacccgaagatagcggaagtcgtg
tccaaggagctgtccaagtcctccgtggtcgtgttcgacgaggctcacaacatagacaac
gtctgcattgactcgatgagcgtgaagatcaaccgccgcaccatcgagaagagctccgcc
aatctgcaggtcctggagaagactgtgtctgagatgaaggaggacgatgccaacaagctg
cgggaggagtaccagcgcctggtggacggcttgagggacgccagcgtcgcgcgggagact
gacgtcgtcctgtccaaccccgtgctgcccgacgaggtgttgcaagaggcggtgccgggc
aacatccgcacggccgagcacttcgtggcgttcctcaagaggttcgtggagtacctgaag
atgaggctgagggtgcagcacgtggtgcaggagtctcccgccggcttcctgcgcgacgtc
gcgcacaagatctgcatcgagcgcaagcccctgcggttctgcgcggagcggctggcctcg
ctgctgcgcacgctgcagatttccgacctcacggacttctcgccgttgaccctcatcacc
cacctggcgacgctcgtgtccacctacaccaagggcttcaccatcatcgtggagcccttc
gacgacaagacgcccacggtcgccaaccccgtgctgcacttcagctgcctggactcgtcc
atcgccatcaagccggtgttcgagcgcttccagacggtcgtcatcacgtcgggcacgctg
tcgcccctcgacatgtaccccaagatcctggacttccaccccgtcatcatgagctccttc
accatgacgctcgcccgcccctgcctgctgcccatgatagtgtcgaagggcaacgaccag
gtggccatctcgtcgcgcttcgagacgcgcgaggacgtggccgtggtgcgcaactacggc
cagctgctggtggaggtggcgtcggccgtgccggacggcgtcgtctgcttcttcacctcc
tacatgtacctggagagcgtggtggcgtcctggtacgaccagggcgtggtggacagcctg
cagcgctgcaagctgctcttcatcgagacccaggactccgccgagaccagcctggccctg
ctcaactacatcaaggcgtgcgagagcgggcgcggcgccgtgctgctgtccgtggcgaga
ggcaaggtgtccgagggagtggacttcgaccaccacctggggcgcgcggtgctcatgttc
ggcatcccgtacgtgtacacccagtccaggatcctgcgcgcacgcctcgactacctgcgc
gaccagttccagatccgagagaacgacttcctgacgttcgacgccatgcggcacgctgcc
cagtgcgtggggcgtgccatcaggggcaagaccgactacggcatcatgatcttcgctgac
aagaggttctctcgcgcagacaagcgcagcaagctgcccaagtggatccaggagcacctc
aaggactcctactgcaacctgtccacggaggaggccgtgcagatcctgaagcgctggctg
cggcagatggcgcagccgttcagccgcgaggaccagctggggctgtccctgctcacgtat
gagcagctgcagtctgaggagatgcagaagaagctgcagaaggcagctgagcagctgtga
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integrated database retrieval system
