Bacillus rossius redtenbacheri: 134531661
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Entry
134531661 CDS
T09888
Name
(RefSeq) DNA repair protein RAD50-like
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03440
Homologous recombination
bror03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
134531661
03450 Non-homologous end-joining
134531661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bror03032
]
134531661
03400 DNA repair and recombination proteins [BR:
bror03400
]
134531661
DNA replication proteins [BR:
bror03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
134531661
DNA repair and recombination proteins [BR:
bror03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
134531661
BRCA1-C complex
134531661
NHEJ (non-homologous end-joining)
MRX complex
134531661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_21
AAA_15
Rad50_zn_hook
SbcC_Walker_B
AAA_29
ABC_tran
AAA_22
AAA_13
HATPase_c_4
NACHT
AAA_16
Motif
Other DBs
NCBI-GeneID:
134531661
NCBI-ProteinID:
XP_063223509
LinkDB
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Position
5:complement(27065305..27345579)
Genome browser
AA seq
1299 aa
AA seq
DB search
MARLHKLYIKGVRSYGPFDDDEQCVVFMSPITLIMGQNGSGKTTVIEALKYATTGDAPPG
SQRGQYFIHDPKLSSVSEVYAMIKLVFKDVEDQEWSVTRRMKLNEKLKTLELMISRVDKE
GVNRDFRGRCGNENVLSVALGVSKPILNHVIFCHQEESCWPLDEAKTLKEKFDAIFNITK
YNKCIEIVRKLCKKIEDELKVLNNQLANDQIHKKQAEDKRRSFRETEERCADSSKKIENF
ENDLEEVRKALEKVYETERNINKLQCEHDSKKRQLEVVKNHQIELRQTIKEEFAGSTQEL
YNAIEMFNEKLSVKENELTELEASMQVVKAEEREVVSEVSQLQLQVARMEEEQRQQQSRE
RSRNSTLAQLARQLGLQELDPAEVAHVAEVMSEVRRKVALLKEQLDAVRVQLEAEEQHSQ
SKIDNCREEVTSLNQEIRMKKEQLNQKKSDERKAARQIAGVKISDADVEKVDAELDRVTM
DLKVAQSMHEAENWKEKLGELRGQRTEFEKNLRAVDERVIELQSQSNLLAEIKILEQTKA
EKEEKILSLEKDLQKPMMMLFKKFPSTNIKQCMDDVLSKCENAIREKNKLVNAKQNELSM
LEYKRKEQDAKLSSMEEEVQRNKDSIFDMCGSDDLETTLKSLQKEIQDLQDEKGVLSSSE
AMYRHYIDKMQQNKPCCPLCHRGFQEQASVEELIGELTGKMSAVPALLRAKEGRLEALQK
KYDNLLQLQPAHKHCRQLKTVDIPAARSALEETGRRAEQALAAGEELRRALSELQTREKV
AKGALGDVLQLSQLRAEVTQLEQRRAGMVANMIDDPAQSLQATLDKQSRLRKDLDATSKE
LDNLRTRFDSSQTELNNLQDRRNQLFAKHLKIQGDLQMRRQLEEKREECEKDIAVLSISI
DDLSERLEPANIQLQTAIEDKVKLQTENRRKLDTKRSEVGGAQKQLDEAEKLQRDIEAYE
QRGVPGKLRHSREEVQRLEASRAALETRRQGVADRIDHVRLYLASQKDQERELQDNLKLR
DKLEEERELAGETKELRRQVAAVSGKAVLLKRRQLETEHTALLTEKAQCTGQLKELKEIM
GSLQKELNTPIFKNADDKFNETSFTIKVKHLAKEDLQSYSQAMEWAVTHFHSERMKIINT
IIRNLWRQIYCGSDIDYIEIKTGSDAKSTMKRRSYTYKVVQVKSGVEMNMRGRCSGGQKV
LASLIIRIALAETFSTKCAFLALDEPTANLDRENINNFVHALADIVKTRGVRRKFQLIII
THDQQFLEMLNDQHLATEYFRVDRNARARSVIEKHRVVL
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtttgcacaagctgtacataaagggcgtgcgcagctacggcccgttcgacgac
gacgagcagtgcgtggtgttcatgtcacccatcacgctgatcatgggccagaacggctcg
ggcaagaccactgtaatagaggcgctgaagtacgccacgacgggcgacgcacctcctggg
agccagcgaggacagtacttcatccacgaccccaagctgtcctcagtctcggaggtctac
gccatgattaaattggtgtttaaagatgttgaagatcaagagtggagtgtaactaggagg
atgaagttgaatgaaaaacttaagactttggaattgatgatctcaagagtcgataaggag
ggagttaacagagattttcggggtcgttgtggtaatgagaatgtcttgtcagtggccctg
ggagtgtcaaagccaatactgaatcatgtcattttctgtcatcaagaggaatcctgttgg
cctttggatgaagcaaagacgttaaaggaaaaatttgatgctatttttaacatcacaaaa
tacaacaagtgcatagaaattgttagaaaactgtgtaagaagattgaagatgaactaaaa
gttttgaacaatcagctggcaaatgaccaaatccacaaaaagcaagccgaagacaaacga
agaagttttcgtgaaacagaagaacgttgtgctgacagttccaaaaaaatagaaaatttt
gaaaatgatttggaggaagtgaggaaggccttagaaaaagtgtatgaaacggaacgtaac
atcaacaaattacagtgtgaacatgacagcaagaaacgtcagttggaagttgtgaagaat
catcaaattgaattgcgacagaccatcaaagaggaattcgcaggctccactcaagaacta
tacaatgccatagaaatgttcaatgaaaaactttctgttaaggaaaatgaattgacagaa
ctggaggcgagcatgcaggtggtgaaggcagaggagagggaggtggtgtccgaggtcagc
cagctgcagctgcaggtggcgaggatggaagaggagcagcgccagcaacagagcagggag
cgcagtcgcaacagcaccctggcacagctggcccggcagctggggctgcaggagctggac
ccagccgaggtggcgcatgtggccgaggtgatgtcggaggtgaggaggaaggtggccctc
ctcaaggagcagctggatgctgtgagggtgcagctggaggcagaagagcagcactcccag
tccaagatcgacaactgcagggaggaggtcaccagtcttaatcaggaaatacgtatgaaa
aaggagcagttaaatcagaagaagagtgatgaacgaaaagcagcaaggcagattgctggg
gtgaaaatatcggatgcggatgtggagaaggtagacgcagagctggacagggtcaccatg
gatctgaaagtggcacaaagcatgcacgaagctgagaactggaaggagaagttgggagaa
cttagggggcagcgaacagaatttgagaagaacttgcgagctgtagatgaacgtgttata
gaacttcagagtcagagtaacttgctagcagagataaagatcttggagcaaactaaggca
gaaaaagaagagaaaatccttagcctagagaaggatttgcagaagccgatgatgatgcta
tttaagaaattcccttctaccaatatcaagcaatgcatggatgatgttctcagcaaatgt
gagaacgcaatacgagagaagaacaagctcgtgaacgcgaagcagaacgagctgtcgatg
ctggagtacaagcgcaaggagcaagatgccaagctcagttcgatggaagaggaagtgcag
agaaataaagactccatatttgacatgtgtggcagtgatgacttggaaacaaccttgaaa
tctcttcaaaaagaaatacaggatcttcaggatgagaaaggcgtcctgtcgtcctcggag
gcgatgtacagacactacattgacaagatgcagcagaacaagccttgctgtcccctctgt
caccggggtttccaggaacaagccagtgtggaggagctgattggtgaactgacgggcaag
atgagtgcagtgccagctctgctgcgagccaaggagggtcgactagaggcgctccagaag
aagtatgacaacttgttgcagctgcagccagcgcacaagcattgccgccagctgaagact
gtggacattcccgcagccaggtctgcgttggaggagacaggcaggagagcggagcaggca
cttgcggctggggaggagctgaggagagcactgtcggagctgcagacgcgggagaaggtg
gcgaagggtgctcttggcgacgtgctgcagctgagccagctgcgtgcggaggtcacccag
ctggagcagcgcagggccggcatggtcgccaacatgatagatgatcctgcacagagcctg
caggctacgctggacaagcagtccaggctgcgcaaagaccttgatgcgacctccaaggag
ctggataacctccgcaccaggttcgactcctcccagacggagctcaacaacctccaagac
cgcaggaaccaactgtttgccaagcacctcaagatacaaggcgacctgcaaatgcgcaga
cagctggaggagaaaagggaagaatgtgaaaaagacattgctgttctgtctatcagcatc
gatgatttaagtgagaggctggaaccagctaacatacaactgcaaactgccatcgaagac
aaggtgaagctacagacggagaaccgcagaaagctggacactaaaaggagtgaggtgggc
ggggcccagaagcagctggacgaggcggagaagctccagagggacatcgaggcgtacgag
cagcggggcgtgcccgggaagctgcggcactccagggaggaggtccagcggctggaggcc
agcagggccgcgctggagacgcgcaggcagggcgtggcggaccgcatcgaccacgtcagg
ctgtacctggcctcccagaaggaccaggagcgggagctgcaggacaacctgaagctgcgg
gacaagctggaggaggagcgggagctggcgggcgagacgaaggagctgaggaggcaggtg
gcggccgtcagcgggaaggctgtgctgctgaagaggaggcagctggagacagagcacacc
gcgctgctcaccgagaaagcccagtgtacaggtcagcttaaagagctgaaggaaattatg
ggaagtttacagaaagagcttaacacaccaatttttaagaatgctgatgataagttcaat
gaaacatcatttactataaaggttaagcatcttgccaaagaagacttgcaaagctattct
caggctatggaatgggcggtcacacacttccactctgagcgcatgaagataatcaatacc
atcatacgtaacttgtggcggcagatatactgtggctctgacatagactacatagagatt
aagactggctctgatgctaaaagcaccatgaagcgacgcagctacacgtacaaggtggtg
caggtgaagtccggagtggagatgaacatgaggggtcgctgcagcggcggccagaaggtt
ttggcctccttgatcattcgcatagcactggccgagacattcagcaccaagtgtgcgttc
ctggccctggatgaaccaactgccaacctggacagggaaaacatcaacaactttgtgcat
gctctcgcagacatcgtgaagacgcgcggtgtgaggcgcaagttccagctgatcatcatc
acgcacgaccagcagttcctggaaatgttgaacgaccagcaccttgccaccgagtacttc
cgtgtcgaccgcaatgcacgagcaagatctgtgattgagaagcatcgagtggtgttgtag
DBGET
integrated database retrieval system
