Bacillus rossius redtenbacheri: 134531663
Help
Entry
134531663 CDS
T09888
Name
(RefSeq) DNA repair protein RAD50-like
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03440
Homologous recombination
bror03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
134531663
03450 Non-homologous end-joining
134531663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bror03032
]
134531663
03400 DNA repair and recombination proteins [BR:
bror03400
]
134531663
DNA replication proteins [BR:
bror03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
134531663
DNA repair and recombination proteins [BR:
bror03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
134531663
BRCA1-C complex
134531663
NHEJ (non-homologous end-joining)
MRX complex
134531663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_21
AAA_15
Rad50_zn_hook
SbcC_Walker_B
ABC_tran
AAA_29
AAA_13
AAA_22
NACHT
HATPase_c_4
AAA_16
Motif
Other DBs
NCBI-GeneID:
134531663
NCBI-ProteinID:
XP_063223512
LinkDB
All DBs
Position
5:27387285..27640827
Genome browser
AA seq
1304 aa
AA seq
DB search
MARLHKLYIKGVRSYGPFDDDEQCVVFMSPITLIMGQNGSGKTTVIEALKYATTGDAPPG
SQRGQYFIHDPKLSSVSEVHSMIKLVFKDVEDQEWSVTRRMKLTQKLKKIEFKTLELMIS
RVDKEGVNRDFRGRCVNENVLSAALGVSKPILNHVIFCHQEESCWPLDEAKTLKEKFDAI
FNITKYNKCIEIVRKLCKKIEDELKVLNNQLANDQIHKKQAEDKRRSFRETEERCAGSSK
KIENFENDLEKVRKALEKVYETERNMNKLQCEYDSKKRQLEVVKNHQIELRQTIKEEFAG
STQELYNAIEMFNEKLSVKENELTELEASMQVVKAEEREVVSEVSQLQLQVARMEEEQRQ
QQSRERSRNSTLAQLARQLGLQELDPVDVAHVAEVMSEVRRKVALLREQLDAVRVQLEAE
EQHSQSKIDNCREEVTSLNQEIRMKKEQLNQKKSDERKAARQIAGVKISDADVEKVDAEL
DRVTMDLKVAQSMHEAENWKEKLGELRGQRTEFEKNLRAVDERVIELQSQSNLLAEIKIL
EQTKAEKEEKILSLEKDLQKPMMMLFKKFPSTNIKQCMDDVLSKCENAIREKNKLVNAKQ
NELSMLEYKRKEQDAKLSSMEEEVQRNKDSIFDMCGSDDLETTLKSLQKEIQDLQDEKGI
LSSSEAMYRHYIDKMQQNKPCCPLCHRGFQEQASVEELIGELTGKMSAVPALLRAKEGRL
EALQKKYDNLLQLQPAHKHCRQLKTVDIPAARSALEETGRRAVQALAAGEELRRALSELQ
TREKVAKGALGDVLQLSQLRAEVAQLEQRRAGMVANMIDDPAQSLQATLDKQSRLRKDLD
ATSKELDNLRTRFDSSQTELNNLQDRRNQLFAKHLKIQGDLQMRRQLEEKREECEKDIAV
LSISIDDLSERLEPANIQLQTAIEDKVKLQAENRRKLDTKRSEVGGAQKQLDEAEKLQRD
IEAYEQRGVPGKLRHSREEVRRLEASRAALETRRQGVADRIDHVRLYLASQKDRERELQD
NLKLRDKLEEERELADETEELRRQLAAVSVKAVLLKRRQLETEHTALLTEKAQCTGQLKE
LKEIMGSLQKELNTPIFKNADDKFNETSFTIKVKHLAKEDLQSYSQAMEWAVTHFHSERM
KIINTIIRNLWRQIYCGSDIDYIEIKTGSDAKSTMKRRSYTYKVVQVKSGVEMNMRGRCS
GGQKVLASLIIRIALAETFSTKCAFLALDEPTANLDRENINNFVHALADIVKTRGVRRKF
QLIIITHDQQFLEMLNDQHLATEYFRVDRNARARSVIEKHRVVL
NT seq
3915 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtttgcacaagctgtacataaagggcgtgcgcagctacggcccgttcgacgac
gacgagcagtgcgtggtgttcatgtcacccatcacgctgatcatgggccagaacggctcg
ggcaagaccactgtaatagaggcgctgaagtacgccacgacgggcgacgcacctcctggg
agccagcgaggacagtacttcatccacgaccccaagctgtcctcagtctcggaggtccac
tccatgattaaattggtgtttaaagatgtcgaagatcaagagtggagtgtaactaggagg
atgaagttgactcagaaacttaagaagattgaatttaagactttggaattgatgatctca
agagtcgataaggagggagttaacagggattttcggggtcgttgtgttaatgagaatgtc
ttgtcagcggccctgggagtctcaaagccaatactgaatcatgtcattttctgtcatcaa
gaggaatcctgttggcctttggatgaagcaaagacgttaaaggaaaaatttgatgctatt
tttaacatcacaaaatacaacaagtgcatagaaattgttagaaaactgtgtaagaagatt
gaagatgaactaaaagttttgaacaatcagctggcaaatgaccaaatccacaaaaagcaa
gccgaagacaaacgaagaagttttcgtgaaacagaagaacgttgtgctggctcttccaaa
aaaatagaaaattttgaaaatgatttggagaaagtgaggaaggccttagaaaaagtgtat
gaaacggaacgtaacatgaacaaattacagtgtgaatatgacagcaagaaacgtcagttg
gaagttgtgaagaatcatcaaattgaattgcgacagaccatcaaagaggaatttgcaggc
tccactcaagaactatacaatgccatagaaatgttcaatgaaaagctttctgttaaggaa
aatgaattgacagaactggaggcgagcatgcaggtggtgaaggcagaggagagggaggtg
gtgtccgaggtcagccagctgcagctgcaggtggcgaggatggaagaggagcagcgccag
caacagagcagggagcgcagtcgcaacagcaccctggcgcagctggcccggcagctgggg
ctgcaggagctggacccagtcgacgtcgcgcatgtggccgaggtgatgtcggaggtgagg
aggaaggtggccctcctgagggagcagctggatgctgtgagggtgcagctggaggcagaa
gagcagcactcccagtccaagatcgacaactgcagggaggaggtcaccagtcttaatcag
gaaatacgtatgaaaaaggagcagttaaatcagaagaagagtgatgaacgtaaagcagca
aggcagattgctggggtgaaaatatcggatgcggatgtggagaaggtagacgcagagctg
gacagggtcaccatggatctgaaagtggcacaaagcatgcacgaagctgagaactggaag
gagaagttgggagaactcagggggcagcgaacagaatttgagaagaacttgcgagctgta
gatgaacgtgttatagaacttcagagtcagagtaacttgctagcagagataaagatcttg
gagcaaactaaggcagaaaaagaagagaaaatccttagcctagagaaggacttgcagaag
ccgatgatgatgctatttaagaaattcccttctaccaatatcaagcaatgcatggatgat
gttctcagcaaatgtgagaacgcaatacgagaaaagaacaagctcgtgaacgcgaagcag
aacgagctgtcgatgctggagtacaagcgcaaggagcaagatgccaagctcagttcgatg
gaagaggaagtgcagagaaataaagactccatatttgacatgtgtggcagtgatgacttg
gaaacaaccttgaaatctcttcaaaaagaaatacaggatcttcaggatgagaaaggcatc
ctgtcgtcctcggaggcgatgtacagacactacattgacaagatgcagcagaacaagcct
tgctgtcccctctgtcaccggggtttccaggaacaagccagtgtggaggagctgattggt
gaactgacgggcaagatgagtgcagtgccagctctgctgcgagccaaggagggtcgacta
gaggcgctccagaagaagtatgacaacttgttgcagctgcagccagcgcacaagcattgc
cgccagctgaagactgtggacattcccgcagccaggtctgcgttggaggagacaggcagg
agagcggtgcaggcacttgcggctggggaggagctgaggagagcactgtcggagctgcag
acgcgggagaaggtggcgaagggagctcttggtgacgtgctgcagctgagccagttgcgt
gcggaggtcgcccagctggagcagcgcagggccggcatggtcgccaacatgatagatgat
cctgcacagagcctgcaggctacgctggacaagcagtccaggctgcgcaaagaccttgat
gcgacctccaaggagctggataacctccgcaccaggttcgactcctcccagacggagctc
aacaacctccaagaccgcaggaaccaactgtttgccaagcacctcaagatacaaggcgac
ctgcaaatgcgcagacagctggaggagaaaagggaagaatgtgaaaaagacattgctgtt
ctgtctatcagcatcgatgatttaagtgagaggctggaaccagctaacatacaactgcaa
actgccatcgaagacaaggtgaagctacaggcggagaaccgcagaaagctggacactaaa
aggagtgaggtgggcggggcccagaagcagctggacgaggcggagaagctccagagggac
atcgaggcgtacgagcagcggggcgtgcccgggaagctgcggcactccagggaggaggtc
cggcggctggaggccagcagggccgcgctggagacgcgcaggcagggcgtggcggaccgc
atcgaccacgtcaggctgtacctggcctcccagaaggaccgggagcgggagctgcaggac
aacctgaagctgcgggacaagctggaggaggagcgggagctggcggacgagacggaggag
ctgaggaggcagctggcggccgtcagcgtgaaggcggtgctgctgaagaggaggcagctg
gagacggagcacaccgcgctgctcaccgagaaagcccagtgtacaggtcagcttaaagag
ctgaaggaaattatgggaagtttacagaaagagcttaacacaccaatttttaagaatgct
gatgataagttcaatgaaacatcatttactataaaggttaagcatcttgccaaagaagac
ttgcaaagctattctcaggctatggaatgggcggtcacacacttccactctgagcgcatg
aagataatcaataccatcatacgtaacttgtggcggcagatatactgtggctctgacata
gactacatagagattaagactggctctgatgctaaaagcaccatgaagcgacgcagctac
acgtacaaggtggtgcaggtgaagtccggagtggagatgaacatgaggggtcgctgcagc
ggcggccagaaggttttggcctccttgatcattcgcatagcactggccgagacattcagc
accaagtgtgcgttcctggccctggatgaaccaactgccaacctggacagggaaaacatc
aacaactttgtgcatgctctcgcagacatcgtgaagacgcgcggtgtgaggcgcaagttc
cagctgatcatcatcacgcacgaccagcagttcctggaaatgttgaacgaccagcacctt
gccaccgagtacttccgtgtcgaccgcaatgcacgagcaagatctgtgattgagaagcat
cgagtggtgttgtag
DBGET
integrated database retrieval system
