Bacillus rossius redtenbacheri: 134531798
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Entry
134531798 CDS
T09888
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror04120
Ubiquitin mediated proteolysis
bror04137
Mitophagy - animal
bror04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
134531798
04120 Ubiquitin mediated proteolysis
134531798
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
134531798
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bror04131
]
134531798
04121 Ubiquitin system [BR:
bror04121
]
134531798
03029 Mitochondrial biogenesis [BR:
bror03029
]
134531798
Enzymes [BR:
bror01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
134531798
Membrane trafficking [BR:
bror04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
134531798
Aggrephagy
Other aggrephagy associated proteins
134531798
Xenophagy
Other xenophagy associated proteins
134531798
Ubiquitin system [BR:
bror04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
134531798
Mitochondrial biogenesis [BR:
bror03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
134531798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_14
zf-RING_12
IBR_2
ubiquitin
IBR_1
IBR
Rad60-SLD
Rad60-SLD_2
Motif
Other DBs
NCBI-GeneID:
134531798
NCBI-ProteinID:
XP_063223808
LinkDB
All DBs
Position
5:52200580..52233407
Genome browser
AA seq
473 aa
AA seq
DB search
MSFIFVFLKRIFESMIKVLSFSKRTFTNTLNINIKTNTGSTLSVDLDPKWDIKNVKEIVA
PQLGFAPEELKIIFAGKELHDSTVIEECDLGQQSILHAVKTRSPPSSSPESQDVASEGSR
PLCETLIDLQLQDVDRRGPVSPEEREKKRAHFYVYCASPCRGLRPGKLRVRCAHCKGGAI
VVDRDPQCWDDVLQRHRITGDCQNQGCDESEDGLKFAEFFFKCAEHASQGEDDQAVPLYL
IKANIHDVPCLACTDISDPVLVFPCNAGHVTCLDCFRTYCLSRLRDRQFWSHPEHGYTLP
CPAGCENSFVAEVHHFRLLPPEQYAQYQRFGAEEYVLQAGGVLCPRPGCGMGILVEPECK
KVTCVSGCGFVFCRHCLQGYHLGDCLPDGGQSGTSGGCEYSVDPSRAAQSRWDDASKVTI
KVLTKPCPQCRTPTERDGGCMHMMCTRPQCGFEWCWVCQTEWTRECMGSHWFG
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgagttttatttttgtttttttgaaacgaatttttgaaagtatgataaaagtattatca
tttagtaaacgcacctttacaaatactttaaacattaacattaaaactaatactggtagc
actttatcagtcgatttggatccaaagtgggacattaaaaacgtgaaagaaatcgtggct
cctcagctaggattcgctcctgaggaattgaagataatttttgcaggaaaggaacttcat
gattctacagtgatcgaagagtgtgaccttgggcagcagagcatactgcatgctgttaag
acacgctctcctcccagcagcagcccggagtctcaggatgtagccagcgagggctcgcgg
cctctgtgtgaaacgctgatcgacttgcagctacaggatgtcgaccgccgtgggccggtc
tctccagaagagcgcgagaagaagcgcgcccacttctacgtgtactgcgcgtcgccgtgc
cggggcttgcggccgggcaagctgcgtgtgcgctgcgcccactgcaagggcggggccatc
gtcgtggaccgcgacccgcagtgctgggacgacgtgctgcagaggcacaggatcaccggc
gactgccagaaccaaggatgcgatgaatctgaagatggcctcaagtttgcagagttcttt
ttcaaatgtgcagagcacgcctcccaaggagaggacgaccaggcagtgccgttgtacctc
atcaaggccaacattcacgatgtgccgtgtttagcctgtacggacatcagtgacccagtg
ctggtgttcccttgcaatgctggccacgtgacgtgcctggactgcttccgaacgtactgc
ttgtcccggctgcgcgacaggcagttctggtcgcatcccgagcacggctacacgctgccg
tgcccggccggctgcgagaattccttcgtcgcggaggtgcaccacttccggctcctgccc
ccagagcagtacgcccagtaccagaggttcggcgcggaggagtacgtcctgcaggcgggc
ggggtgctgtgcccgcggcccggctgtggcatgggcatcctggtggagccggagtgcaag
aaggtcacctgcgtcagcggctgcgggtttgttttctgccgtcactgcctgcaaggatac
caccttggtgactgcctgcccgacggagggcagtctgggacgtcgggaggctgcgagtac
agcgtggaccccagccgagctgcccagtcgcgatgggatgatgctagcaaagtgactatc
aaggtactgacgaaaccatgcccccagtgtcgcactccaactgaaagagatggtggttgc
atgcacatgatgtgtacgaggccacagtgtggtttcgagtggtgctgggtgtgccagaca
gagtggacccgtgagtgcatgggcagccattggttcggatag
DBGET
integrated database retrieval system
