Bacillus rossius redtenbacheri: 134532023
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Entry
134532023 CDS
T09888
Name
(RefSeq) exosome complex component 10 homolog
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134532023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bror03019
]
134532023
Messenger RNA biogenesis [BR:
bror03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
134532023
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
PMC2NT
HRDC
AAA_lid_7
Motif
Other DBs
NCBI-GeneID:
134532023
NCBI-ProteinID:
XP_063224220
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All DBs
Position
5:75432303..75464893
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AA seq
897 aa
AA seq
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MKGGLKKTLEMENFGNNNGLGQNSESSSTAAKSSDMNNDDTFLPGYPTIDDFIKAGTAAL
VQCTQLSNKLPSKDNWEYFCTYPAFQSALKKERGKILKVISKLLRSQKIQGNILQRDLEE
QLDLIIDANDTILEHVANNLDEMDGHRRDPEVELVEAVIQPSASGSWNAARPAVSPAHVG
ATPTLLAPSPATPPAIRLLTAKNIERPQAKFKDKIDNSPQPFQPRIKDKPNASTPLALFL
EASDGGENFNHPYEYELAHFVAPETQLTAVPLQGCRPLEDTPLVMVQRAHELADMLAELR
AHSEIAVDLEHHSYRSFLGITCLMQISTREKDYIVDTLELRDKLHVLNEVFTKPSVVKVF
HGADYDVEWLQRDLGLYVVNMFDTHQAARALSLPHLSLAYLLLKYCAVTADKKYQLADWR
IRPLPKELVKYAREDTHYLLCIYDIMKNALIEAANGKSNILQSVIQCSTEICKKRYVKPV
LTEDSHMDLYRHNKKLFDNQQMFALRELFRWRDRVAREEDESVGYVLPSHMLLQMAEKLP
REMQGVLACCKPIPAHVRKNLVQLHQLILQARDQPLVKPILEEEIRARVAAPSLHKIDLD
GPLHCPHDLSRQQDFRDDLPVLLGAAGGGPRDRGTAPRLAKPRPEITVFQSEAVTLEVRD
GAGQLSPPKKKVKQLTFVCPYDRYKLVRPYTDAEKAKEAAEKAEAAKPASAKDSETASAD
DDERISRIHRHFMQVAEGVAPASQESPQSPEPWEEPAAAPPATIDCGIDTLRKQAKRKSE
DDSVLQPRVSKQARLEGEGEGEEVAAEASPSKRRRKKKPKKDGEGEGPPAAGGDREQREF
RPYDYGSVDYGAYSGGSKKHVAKNQQSQHRGVFRPRGKMKKFRGANRSMTFQNQRNW
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtggtttaaagaaaacgttggaaatggaaaactttggcaataacaacggctta
ggtcaaaattccgaatcatcgtctacggctgcaaaatccagtgatatgaacaatgacgat
acatttttgccaggatatccaacaatagatgattttataaaggcgggtacagcggccctg
gtgcagtgcacgcagctttccaacaagctgccgtccaaggacaactgggagtacttctgc
acctaccccgctttccagagtgccctcaagaaggaacgcggcaagatcttgaaagtgatt
agtaagctgcttcgtagtcagaagatccagggtaacattttacagcgagatctagaggaa
cagttggatctaatcatcgatgctaacgatacgattctggaacatgtggccaacaacctg
gacgagatggacgggcaccggcgggaccccgaggtggagctggtggaggcggtaatccag
ccgtccgcgagcggcagctggaacgcggccaggccggcggtgtcgcccgcccacgtgggg
gccactccgacactgctcgccccgtcccccgctacacccccggccatccgcctgctgacc
gccaagaacatagagcggccgcaggccaagttcaaggacaagatagacaacagtccacag
ccgttccagccccgcatcaaggacaagccgaatgcttcgacgcccctcgcgctgttcctg
gaggcttcggatggtggcgaaaacttcaaccacccgtacgagtacgagctggcccacttc
gtggccccggagacgcagctgacggcggtgccgctccaggggtgccggcccctcgaggac
accccgctggtgatggtgcagcgggcccacgagctcgcagacatgctcgcggagctgcga
gcccactccgagatcgcggtcgatctggagcatcactcgtacagatcgttcctcgggatc
acgtgcctcatgcagatatccacccgggagaaggactacatcgtcgacacgttggagctc
cgggacaagcttcacgtcctaaacgaggtcttcacgaagcccagcgtcgtcaaggtgttc
cacggggcggactacgacgtggagtggctgcagcgggacctggggctgtacgtggtgaac
atgttcgacacgcaccaggcggcccgggccctgagcctgccccacctctccctcgcctac
ctgctgctcaagtactgcgccgtcaccgctgacaagaagtaccagctggctgactggagg
atcaggccgctgcccaaggagctggtgaagtacgctcgagaggacacccactacctgctc
tgcatctacgacatcatgaagaacgctctcatcgaggcagccaacggcaagtccaacatc
ctgcagtccgtcatccagtgcagcaccgagatctgcaagaagcgctacgtgaagccggtg
ctgacggaggacagccacatggacctgtaccgccacaacaagaagctgttcgacaaccag
cagatgttcgccctcagagagctgttccggtggcgggacagggttgcccgcgaggaggac
gagagcgtggggtacgtgctgcccagccacatgctgctgcagatggcggagaagctgccg
cgcgagatgcagggcgtgctggcgtgctgcaagcccatccccgcgcacgtgcgcaagaac
ctggtccagctgcaccagctgatcctgcaggcccgcgaccagccgctcgtcaagccgata
ctggaggaggagatccgtgcgagagtggccgccccctcgctgcacaagatagacctggac
gggccgctccactgcccccacgacctgtcccgccagcaggacttccgggacgacctcccg
gtcctgctgggagcggcggggggcggccctcgagaccgcggcactgccccgcggctggcc
aagccccggccggagatcacggtgttccagagcgaggcagtgacgctggaggtgagggac
ggcgcgggacagctgtctccgcccaagaagaaagtcaagcagctgacgttcgtgtgcccg
tacgaccggtacaagctggtgcggccgtacacggacgcggagaaggccaaggaggccgcg
gagaaggcggaagccgcgaagcccgcctccgcgaaggattcagagacggcgtcggccgac
gacgacgagagaatcagtcggatccacaggcacttcatgcaagtggcagagggcgtagcg
ccggcctcccaggaatccccacagagccctgaaccctgggaggaaccagccgcggctccc
cctgccacgatagactgtggaatcgacacactacgaaaacaggcgaagaggaagagcgag
gacgactcggtcctgcagccgcgggtctcgaagcaggcgcggctggagggggaaggggag
ggcgaggaagtggcggcggaggccagccccagcaagaggaggaggaagaagaaacccaag
aaggacggcgagggcgaggggccaccggcggcggggggagaccgggagcagcgcgagttc
cggccgtacgactatggcagcgtcgactacggggcgtacagcggcggcagcaagaagcac
gtcgccaagaaccagcagagtcagcaccgaggagtgttcaggccccgggggaagatgaaa
aagtttcgaggtgccaacagaagcatgacatttcaaaaccaaaggaattggtag
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