Bacillus rossius redtenbacheri: 134532805
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Entry
134532805 CDS
T09888
Name
(RefSeq) pre-mRNA-processing factor 6
KO
K12855
pre-mRNA-processing factor 6
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134532805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bror03041
]
134532805
Spliceosome [BR:
bror03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
134532805
Complex C
U5 SnRNP specific factors
134532805
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
HAT_PRP39_N
TPR_19
TPR_16
HAT_Syf1_CNRKL1_N
Suf
HAT_PRP39_C
TPR_17
TPR_9
ARM_TT21_N
CAF1A_acidic
NatA_aux_su
Motif
Other DBs
NCBI-GeneID:
134532805
NCBI-ProteinID:
XP_063225751
LinkDB
All DBs
Position
6:complement(20208903..20224354)
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AA seq
933 aa
AA seq
DB search
MAVPPAALVNRNKKHFMGVPAPLGYVAGVGRGATGFTTRSDIGPARDANDVSDDRHAPPS
KRKKGHQKEEEEDDDEDLNDSNYDEFSGYGGSLFSKDPYDKDDEEADAIYEAIDKRMDEK
RKEYREKRLKEELERYRQERPKIQQQFSDLKRGLVTVSEDEWRNVPEVGDARNRKARNPR
GEKFTPLPDSVLARNLGGESTASIDPTSGLASAFPSGSVTPGMLTPTGDLDLRKIGQARN
TLMNVKLSQVSDSVEGQTVVDPKGYLTDLQSMIPTYGGDINDIKKARLLLKSVRETNPNH
PPAWIASARLEEVTGKVQAARNLIMKGCEVNPKSEDLWLEAARLQPPDTARAVIAQAVRH
IPTSVRIWIRAADLEQETKAKRRVYRKALEHIPNSVRLWKAAVELEEPEDARILLSRAVE
CCPTSVDLWLALARLETYENARKVLNKARENIPTDRQIWTTAAKLEEANGNKHMVDKIIE
RAISSLTANGVEINREHWFKEAIEAEKSGSVHCCQVLIRHIIGVGVEEEDCKHTWMEDAD
ACAAQGAYECARAIYAHALATYPSKKSIWLRAAYFEKNHGTRESLEALLQRAVAHCPKSE
VLWLMGAKSKWLAGDVPAARGILSLAFQANPNSEEIWLAAVKLESENSEYERARRLLAKA
RASAPTPRVMMKSAKLEWALDNLDQSLRLLDEAIKVFPEFPKLWMMKGQIEEQQSKVEKA
FETYSAGIKKCPSAVPLWKLLSSLEERRGMLTKARSVLEKGRLRNPKCADLWLEAVRVEF
RSGLRDIANTQMAKALQECPSSGILWAEAIFLEPRPQRKTKSVDALKKCEHDPHVLLAVS
KLFWCERRIQKCREWFNRTVKIEPDLGDAWAYFYKFELLNGSEDLQEEVKKRCVAAEPHH
GEHWCRVSKDIRNWRFGTEHILALVAKDLPIPV
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggccgttccaccagctgcattagtgaacaggaacaaaaaacattttatgggtgttcct
gcgccccttggttatgttgctggtgttggacgaggagcgacagggtttactacacgttcg
gatattggacccgccagagacgcaaacgacgtatcagacgaccgccacgcaccacccagt
aaaagaaagaaaggtcatcagaaggaagaggaagaagacgatgacgaagatttgaacgat
tccaattatgatgaattttcaggttatggagggtcgctattcagcaaggacccgtacgac
aaggatgatgaagaagcagatgcgatctacgaagccatcgacaagagaatggacgagaag
cggaaggagtatcgcgagaagcgcctgaaggaggaactggagaggtaccggcaggagcga
cccaagatccagcagcagttcagcgacttgaagcggggcctcgtcaccgtgtccgaggac
gagtggcggaacgtcccggaagtgggtgacgcacgcaaccgcaaggcccgcaacccccgc
ggcgagaagttcacccctctgccggactctgtgctggctcgcaacctgggtggcgagtcc
actgcctccatcgacccgacaagtggattggccagcgcttttccatcgggctcggtgacg
cccggcatgctgacccccaccggagacctggacctgcgcaagatcgggcaggcccgcaac
accctgatgaacgtgaagctgtcgcaggtgtcggactcggtggagggccagacggtggtc
gaccccaagggctacctcacggacctgcagagcatgatccccacgtacggaggggacatc
aatgacatcaagaaggcccgtctgctgctcaagtcggtgcgggagacgaaccccaaccac
ccgccggcctggatagcgtccgcccggctggaggaggtgacgggcaaggtgcaggctgct
cgcaacctcatcatgaagggctgcgaggtgaaccctaagtctgaggacctgtggttggag
gcagcaaggctgcagcccccagacacggcgcgcgccgtgattgcgcaggcagtgcgacac
atccccacgtctgtgcgcatctggatcagggcagctgatttggagcaggagaccaaggcg
aagcgccgagtttaccggaaggcactggagcacatccccaactcggtgcggctgtggaag
gcggcagtggaactggaggagccggaggacgctcgcatcctgctgagccgtgcggtcgag
tgctgccccaccagtgtggacctgtggctggccctggcgcgcctcgagacatacgagaac
gctcgcaaggtgctgaacaaggcccgcgagaacatcccgaccgaccgccagatctggacc
acggcagccaagctggaggaggccaacggcaacaagcacatggtggacaagatcatagag
cgagccatctcgtctctgacggccaacggggtggagatcaacagggagcattggttcaag
gaggccatcgaggcagagaagtctggttccgttcattgctgccaggtgctgatccggcac
atcatcggcgtgggggtggaggaagaggactgcaagcacacgtggatggaggacgcggac
gcgtgcgccgcccagggcgcctacgagtgcgcgagggccatctacgcgcacgccctcgcc
acctaccccagcaagaagtccatctggctgcgggcggcctacttcgagaagaaccacggc
acgcgggagagcctggaggcgctgctgcagcgggccgtcgcgcactgccccaagtccgag
gtgctgtggctgatgggagccaagagcaagtggctggccggggacgtgccggccgcccgc
ggcatcctctccctcgccttccaggctaaccccaactcggaggagatctggctggcggct
gtgaaactggagtcggagaactctgagtacgagcgtgcgcggcggctgctggcgaaggcc
cgggcgtctgcccccacgccgcgcgtcatgatgaagtctgccaagctggagtgggcgctg
gacaatctggaccagtccttacggctgctcgacgaggccatcaaggttttcccagagttc
cccaagctgtggatgatgaagggacagatagaggagcagcaaagtaaagtggagaaagcg
tttgagacatacagtgcgggcatcaagaaatgcccgagtgctgtgcctctgtggaagctg
ttgtcatccctggaggagcgccggggcatgttgaccaaggctcgctctgttctggagaag
ggccgcctgcggaaccccaaatgcgcggatctgtggctagaagctgtccgtgttgagttc
aggtcagggctgcgggacatcgccaacacgcagatggccaaggccctgcaggagtgcccc
agctccgggatcctgtgggcggaggccatcttcctggagccccggccccagcgcaagacc
aagagcgtggacgccctgaagaagtgcgagcacgacccgcacgtgctgctggccgtgtcc
aagctgttctggtgcgagcgcaggatacagaagtgtcgcgagtggttcaacaggacggtg
aagatcgagccggacctaggggacgcgtgggcctacttctacaagttcgagctgctgaac
ggcagtgaggacctgcaggaggaggtgaagaagcgctgcgtggcggcggagccccaccat
ggcgagcactggtgtcgcgtctccaaggacatccgcaactggcgcttcggcaccgagcac
atactcgcgctggtcgccaaggacctgcccatccccgtgtga
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