KEGG   Bacillus rossius redtenbacheri: 134532807
Entry
134532807         CDS       T09888                                 
Name
(RefSeq) DNA ligase 1 isoform X1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
bror  Bacillus rossius redtenbacheri
Pathway
bror03030  DNA replication
bror03410  Base excision repair
bror03420  Nucleotide excision repair
bror03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bror00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    134532807
   03410 Base excision repair
    134532807
   03420 Nucleotide excision repair
    134532807
   03430 Mismatch repair
    134532807
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bror03032]
    134532807
   03400 DNA repair and recombination proteins [BR:bror03400]
    134532807
Enzymes [BR:bror01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     134532807
    6.5.1.6  DNA ligase (ATP or NAD+)
     134532807
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     134532807
DNA replication proteins [BR:bror03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    134532807
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     134532807
DNA repair and recombination proteins [BR:bror03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     134532807
   NER (nucleotide excision repair)
    Other NER factors
     134532807
   MMR (mismatch excision repair)
    Other MMR factors
     134532807
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase HVO_A0114 FERM_N_2
Other DBs
NCBI-GeneID: 134532807
NCBI-ProteinID: XP_063225752
LinkDB
Position
6:complement(20507250..20551620)
AA seq 868 aa
MLRTMYYFRGVKADCAIRLCCSSALNDVHCLLLSNPSVTRHVSMWMLSRSGESSGEDSPI
RMVSKKRQRIKSDSESSDDAQNNKTKSGKKKVFNSAVKSLAKLSPGKKEVTGSVGSVNGV
KLEVGTIKEEPCVGSQTEKHVEEIKNVLEPDVLIKEESGVKQEEGEKVMPSEAEADKNLT
DKKQTSGKTVHSFFSRQKSGAQSAGDETNKDKPANYDPSKTNYHPIEDATWAHGEKVPYR
ALARTLEKIENISARLKIIDILANYFRSVMILSPDDLLPSLYLCLNKLAPAYEGLELGVA
ETTLVRAIAQCTGRTLAQVKADAAELGDLGLVAERSRSTQRVMFQPGPLSVPGVFRKLRE
IALMTGQASMGKKVNMIQALFVACKDCEARYLIRSLAGKLRIGLAEQSVLQALAVACVTT
PPGQSFPPEVLNASKTMSADKFKSCLEEVALTIKTTYCECPNYDAMVPVLLREGVAALPQ
HCRITPGVPLRPMLAHPTKGVHEVLQRFEGLTFTCEWKYDGERAQIHLAEDGQVSVYSRN
QENNTSKYPDIVARLSSAVGDKVSSCILDTEAVAWDRQTGQILPFQVLSTRKRKDASEAE
IKVQVCVFVFDLLYLNGEPLVRRPLLERRRLLREHFREVPGEALFATSLDTSAMEQVQDF
LEEAVRGNCEGLMVKTLEQEATYEIAKRSRNWLKLKKDYLEGVGDTLDLVVIGGYLGRGK
RAGTYGGFLLACYDLESEEYQTICKIGTGFSDEDLQQHTELLKTHVIPQPRPYYRYDHSL
APDHWFDAVQVWEVKCADLSLSPVHKAALGIVDSEKGISLRFPRFLRVREKTVEDATSAT
QVAELYRSQEQVKNQHGPTAKTVEEEFY
NT seq 2607 nt   +upstreamnt  +downstreamnt
atgttaaggacaatgtactattttcgtggtgtaaaagcagattgtgctattagattgtgt
tgctcctctgctttgaatgacgtccactgtttgttgctttcgaacccttcggtgacaaga
catgtttccatgtggatgctcagtaggagtggggagtcatctggcgaagactcgcccatt
cgaatggtttctaagaaacggcagaggatcaagagtgacagcgaaagcagtgatgacgct
cagaacaacaagacaaaatctggcaagaaaaaggtgtttaactctgccgttaaatcacta
gcaaagttatcaccaggaaagaaggaagttacaggttctgtaggaagtgtaaatggtgtc
aagttggaagtcggaacaatcaaggaagaaccgtgcgtaggaagtcaaacagagaaacat
gtagaggaaataaagaacgtgttggagccagatgttctcatcaaagaagaatcaggtgtt
aagcaagaagaaggtgaaaaggtgatgccgagtgaggctgaggctgacaaaaaccttacc
gataagaaacagacgagtggcaaaacagttcacagctttttctcacgacagaagtccgga
gctcagtcagcaggggatgagaccaacaaagacaagcctgccaactatgaccccagcaaa
actaactaccatcctattgaagatgctacgtgggcccatggagagaaggtgccatacagg
gccctggctcgaaccttggagaaaatagagaacatcagtgctcggctgaagatcatagac
atcttggcaaactacttccggtctgtgatgatcctgagcccggacgacctcctgcccagc
ttatacctctgcctgaacaagctcgcacccgcctatgaagggctggagctgggcgtggcg
gagacgacgctcgtgagggccatagcgcagtgcacggggcggacgctggcacaggtgaag
gcagacgccgcggagttgggggacctgggcctggtggcggagcgcagccgctccacgcag
cgcgtcatgttccagccgggcccgctctccgtgcccggggtcttccgcaagctcagggaa
atagctctcatgacggggcaggcctcgatggggaagaaagtgaacatgatccaggcgttg
ttcgtggcgtgcaaggactgcgaggctcgctatctgatccgctcactcgctgggaagctg
cggatcggcctggcggagcagtctgtgctacaggccctggcggtggcttgcgtcacgacg
cctccaggtcagtcgtttcctccggaggtgctgaacgccagcaagacgatgtctgcagac
aagttcaagtcgtgcctggaggaagtggccctcaccatcaagaccacttactgcgagtgc
ccgaactacgacgcgatggtgccggtgctgctgcgcgagggtgtggcggcgctcccccag
cactgccgcatcacgcctggggtcccccttcggcccatgctggcgcaccccaccaagggc
gtgcacgaggtgctgcagcgctttgagggactcaccttcacctgcgagtggaagtacgac
ggcgagcgagcacagatccacctggcagaggacggccaggtgagcgtgtacagtcgcaac
caggagaacaacaccagcaagtacccagacattgtcgcgcgactgtccagtgcggtgggg
gacaaggtctcctcgtgcatcctcgacacggaggccgtggcgtgggaccgccagaccggc
cagatcctgcccttccaagtcctcagcaccaggaagagaaaggacgcgagcgaggcggag
atcaaggtgcaggtgtgcgtgttcgtgttcgacctgctgtacctgaacggggagcccctg
gtgcgaaggcccctgctggagcgccgacgcctgctcagggagcacttcagggaggtcccg
ggagaggccctgttcgccaccagcctcgacacctccgccatggagcaggtgcaggacttc
ctggaggaggccgtccgcggcaactgtgaagggctgatggtcaagacgctggaacaagag
gcgacgtacgagatcgccaagcgctcccgcaactggctgaagctgaagaaggactacctg
gagggggtgggggacacccttgacttggtggtcattggagggtacttggggcggggaaag
agggcgggcacctacggcgggtttctgcttgcctgctacgaccttgagagcgaggagtac
cagaccatctgcaagattggaacaggcttcagtgacgaggacctgcagcagcacacggaa
ctcttgaagacccacgtgatcccccagccacggccgtactaccgctacgaccacagcctg
gcccccgaccactggttcgatgccgtgcaggtgtgggaggtgaagtgcgccgacctctcc
ctgtcgccggtgcacaaggctgccctcggcatcgttgacagtgaaaagggcatctccttg
aggtttcctcggtttttacgtgtgcgagaaaagactgtggaagatgctaccagtgccact
caggttgcagagctgtacagaagccaggagcaagtgaagaaccaacatgggccaacagcg
aagacagtagaagaagaattttactag

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