Bacillus rossius redtenbacheri: 134533744
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Entry
134533744 CDS
T09888
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134533744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bror03019
]
134533744
03012 Translation factors [BR:
bror03012
]
134533744
Enzymes [BR:
bror01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
134533744
Messenger RNA biogenesis [BR:
bror03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
134533744
Translation factors [BR:
bror03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
134533744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
HA2_C
OB_NTP_bind
HA2_N
AAA_22
nSTAND3
AAA_19
ATPase
AAA_14
NPHP3_N
NACHT
Rad17
ResIII
T2SSE
AAA_16
Sigma54_activat
AAA_23
AAA_7
SRP54
AAA_11
PhoH
Motif
Other DBs
NCBI-GeneID:
134533744
NCBI-ProteinID:
XP_063227425
LinkDB
All DBs
Position
7:complement(23875266..24018147)
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AA seq
924 aa
AA seq
DB search
MFLSSDVDLMTNFFLDEKCFDTAALANLPALKLDSADKENIKRVLQDIKPSLAKLKLSNS
AFDGSVKPNASTLYDCAGDSDFKNQFLQSITGSIDSRLASSLSTLSILERDRTLDAVLKN
ELLDKQESPSYAKMLEFRKQLPAFQKRAEILSMISSHQVVLISGETGCGKTTQVAQFILD
DFISRGDGSKCHIVCTQPRRISAVSVAERVAQERDDSCGGASVGYHIRLEGKLPRPNGSI
LFCTTGMLLQYMRSDPGLSSMSHLILDEIHERDVFCDFVLAILKDIIRQRKDLKIILMSA
TLNAENFSRYFHNCPMMEIPGFTYPVEEFYLEDVLQLTAFTRFTGPPIQVQRTAHAQMAF
IKQRKQFEDHIVPYARGLKSQMKYSDHVIESLAKSASEELNVELIEALISYICRSKGEGA
ILVFLPGWNEISSLESLLTEAKGYPADHYLIIPLHSQLPTVTQKSVFDQPPPGVRKIVLA
TNIAETSITINDVVYVIDSGKMKMKNFDSENNVATLQAEWVSRSNSRQRKGRAGRVQPGI
CYHLYSKGRENLLAEYPIPEMLRTRLEEVILQMKILQLGQAHSFLTKVMNSPEQKVIALS
VKLLRDLKALDEHENLTPLGYHLANLPLDPHIGKMILMAAIFSCIDPIFTVAASLSFKDP
FIGSMYAAKKVSEAKQKLLKGHVSDHLAVAEAMRQWEQAKTHEDKKKFCQEHFVSGHTLY
MLRDMKGQFAQYLYEMNFLESKDFKFEGANVNSDNVALVNAIICAGLYPNIAIFKTVEHN
RRSGRRYVKFSTREDGLIGVHPKSYAESLNSFASPIVVYHLKLKSSFILLHDVSMVYPMS
LVFFGEKVTCDNNALKVTDQIKFSCVASHAALIKELRDQLDILLKYKITHPGSTDWSESN
FEAKLLRTVISLIESEDKRMTVVS
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgtttttatcaagtgacgttgatttgatgactaacttttttttggatgaaaaatgcttt
gatactgctgctcttgcaaatctaccagctttaaaattggattccgctgataaagagaac
atcaagagagttttacaggatatcaaaccttctttggcaaagttaaagctttcaaatagt
gcctttgacgggagtgttaagccaaatgcttccacgctgtatgattgtgcgggtgatagt
gatttcaagaaccagtttctacagagcatcactggcagcatagattcgagactagcaagt
tctctgtcgacgctgagcattctcgagagggatagaactctggatgctgtgctgaagaat
gagttgctggacaagcaggagagccccagctatgcgaagatgctggagtttcggaagcag
ctccctgccttccagaagagggctgagatcctgtccatgatcagcagtcaccaagttgtc
ctcatcagtggagaaacaggttgtgggaagacaacccaagtggcccagttcatcttggat
gacttcatatcgagaggggacgggtccaagtgtcacattgtgtgcacccagcctcggagg
ataagtgcggtgtctgtcgccgagcgagtggctcaggaaagagacgactcgtgcgggggt
gcctctgttggctaccacatccgtctggaggggaagctgcctcgaccaaatggttccata
ttattttgcaccacaggaatgttactccagtacatgcgttcagatcctggactgagttcc
atgtctcatttaatacttgatgagatacatgagagagatgtgttctgcgactttgtcctg
gccattttgaaagacatcatacgacagagaaaagatctgaaaataatactaatgagtgca
actctgaatgcggaaaatttctcacgttattttcataactgcccaatgatggaaattcct
ggatttacatacccggttgaagaattttacctggaggatgttttgcaactgacagcattc
acaagattcactggtccacccatccaagtgcagagaactgcacatgctcaaatggctttt
atcaagcaaagaaagcagtttgaagaccatatcgtcccatacgcaaggggtctgaaatca
cagatgaagtattccgaccatgtcatcgaaagtctcgcaaagtcagcatcagaagaactg
aacgtagagctgattgaagcgcttataagttacatctgtcgtagtaaaggtgaaggtgct
atactagtttttctccctggctggaatgagatatcaagccttgagagtttgctcactgaa
gctaaaggatacccagctgatcactaccttatcattcctcttcactcccaattgcctaca
gtcacccagaagtctgtgtttgaccagccgccaccaggtgtcagaaaaattgtgttggcc
accaacattgcagagacttccattaccataaatgatgtggtatatgtgattgactctggg
aaaatgaagatgaagaactttgatagtgagaataacgtagcaactttgcaagcggaatgg
gtgagccgatcaaactctcggcagcgaaaaggacgagcaggcagagtgcagccaggcatc
tgttaccatctatactcaaaaggacgtgagaatctcttggcggagtatccaattcctgaa
atgttgcgcacacgtttggaagaagttattcttcaaatgaaaattcttcagctgggccaa
gctcattcatttcttaccaaagtcatgaattccccagaacaaaaggtcatagcactttca
gtgaagcttcttcgagacttgaaggccctggacgaacatgagaacctgactccattgggc
taccatctcgccaacttgccactggacccacacattgggaagatgattctgatggctgcc
attttcagctgcatcgaccctatattcacagttgcagccagcctttccttcaaggatccc
ttcattgggtcaatgtacgctgccaagaaggtgagcgaggcgaagcagaagctgctgaag
ggacacgtcagcgaccacttggcggtagcagaggccatgaggcagtgggagcaggcaaag
acgcacgaggataagaaaaagttctgccaggaacattttgtatcgggacacaccttgtac
atgctgagggacatgaaaggccaatttgcacagtatttgtacgagatgaactttctcgaa
agtaaggatttcaagttcgagggagcaaatgtcaattccgataatgtggcccttgtgaat
gccataatctgtgctgggctgtaccccaacattgcgatctttaagacagtggaacacaat
cgacgctccggcaggaggtatgtgaagttcagcacgcgtgaagatgggctgatcggtgtg
catcccaagagttacgccgagagcttgaatagtttcgctagcccgattgtggtgtaccac
ctgaaactgaagagctcattcatcctgttgcacgatgtttctatggtgtatccaatgtca
ctggtgttcttcggagagaaggtcacgtgcgacaataatgctctgaaagtcaccgatcag
attaagttcagctgtgtagccagtcatgcagctctgattaaggagctgcgagaccaactg
gatatattactgaagtacaagattactcacccgggttccaccgactggagcgaaagtaac
tttgaggctaagttactgaggactgtgatcagtttaatagaaagtgaagacaagaggatg
acagttgtttcttga
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