Bacillus rossius redtenbacheri: 134533920
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Entry
134533920 CDS
T09888
Name
(RefSeq) cartilage oligomeric matrix protein
KO
K04659
thrombospondin 2/3/4/5
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror04145
Phagosome
bror04512
ECM-receptor interaction
bror04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134533920
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
134533920
09142 Cell motility
04820 Cytoskeleton in muscle cells
134533920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bror04131
]
134533920
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bror04147
]
134533920
00536 Glycosaminoglycan binding proteins [BR:
bror00536
]
134533920
Membrane trafficking [BR:
bror04131
]
Endocytosis
Phagocytosis
Opsonins
134533920
Exosome [BR:
bror04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
134533920
Exosomal proteins of colorectal cancer cells
134533920
Exosomal proteins of bladder cancer cells
134533920
Glycosaminoglycan binding proteins [BR:
bror00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
134533920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_3
EGF_CA
COMP
cEGF
Motif
Other DBs
NCBI-GeneID:
134533920
NCBI-ProteinID:
XP_063227789
LinkDB
All DBs
Position
1:complement(31526996..31667355)
Genome browser
AA seq
1041 aa
AA seq
DB search
MKSAPCRLAWLLGPLMLVLLPSLAGAVSMDQEASKVLEDVIAGDNFVISLKHIKPRRRLR
GSVETMFAVDFPGSQQKFVLMLDRRTKRVIVETVEDGRTRSQHFTVDTLTEGSILKSLVV
AVDQEQPGAHVTLYVDCSSQGMVATPRSMRDMHAKMAHPRLQVFRERRYVLEVDGPGGLS
NVLNRNNCPSNIMQAIQPATNEIPIPRGDIPISGDCDTDALLMKTLTQLVTQVTELRNEA
QRQRAEIYHVRQILEKCDICDALSMMRRPTCGSNPSPCFPGVGCQETAEGVRCGACPRGY
VGDGRSCKPGVTCEQRPCYPGVQCYDTVEGFHCGPCPAGMTGDGRRCKGRRGCDSSPCHP
GVQCVSMDEPPYYRCGSCPPGSRGNGSVCQDVDECDLAEPCDPRARCTNLSPGFRCAPCP
AGFTGSSGMEGVGLEVARRNKQRCHDIDECADGRNGGCVPRSACINTQGSFHCGQCQRGF
VGNQTVGCHNRPGMCPDGSVCDPNADCVRTGPECCITYKCKCKIGWAGDGKNCGPDRDLD
GWPDEDLGCSDPKCRKDNCVGIPNSGQEDADRDNIGDICDDDADNDGIPNKPDNCPLVPN
PDQLDTDRDGADHQGDACDNCPTIPNSDQSDVDKDGLGDVCDADMDDDRVENHVDNCPKK
YNPDQLDTDRDGLGDVCDNCPRVPNADQQDVDNNLIGDACDDGNDRDKDGIQDSRDNCPT
VANSNQLDTDRDGRGDECDPDKDDDGIPNHRDNCPIVPNPYQEDRDGDGTGDACQDDWDN
DRVRNHLDNCPNNSKISSTDFRTYQTVVLDPEGDSQIDPNWVIYNKGAEIVQTMNSDPGL
AVGYDQFGGVDFEGTFFVDTEMDDDYAGFIFSYQNNKKFYTVMWKKSAQTYWQATPFRAV
AEPGIQLKLVDSGTGPGQMLRNSLWHTGDTEDQVKLLWKDPRNVGWRERVAYRWLLLHRP
KIGLIRLRIFEGEHMVADSGNVYDSTLKGGRLGVFCFSQEMVIWSDLVYRCNENVPKPIY
LELPLKLREQVSVEDSSSIGL
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccgcgccgtgccggctcgcctggctgctgggcccgctgatgctggtgctgctg
ccgagcctggcgggcgccgtgtccatggaccaagaggcgtccaaggtgctggaggacgtg
atcgccggcgacaacttcgtcatcagcctgaagcacatcaagccgcggcggcggctgcgc
ggcagcgtcgagaccatgttcgccgtcgacttccccggctcgcagcagaagttcgtgctc
atgctggaccgccgcaccaagcgagtgatcgtggagacggtggaggacgggcgcacgcgc
tcgcagcacttcacggtcgacacgctgaccgagggatcgatcctcaagtcgctggtggtg
gccgtcgaccaggagcagcccggagcgcacgtgacgctctacgtggactgcagctcgcag
ggcatggtggcgacgccgcgctccatgcgcgacatgcacgccaagatggcgcacccgcgc
ctgcaagtcttccgggagcgacgctacgtcctggaagtggacggtcctgggggactcagc
aacgtgctcaacaggaacaactgtccgtcgaacatcatgcaagccatccagcccgccacc
aacgagatacccattccaagaggagacattcctatatccggagactgtgatactgatgcg
ctcctaatgaagactctgactcagctggtgactcaggtgacagagctgcggaatgaagcg
cagagacagagggccgaaatataccatgttcgacaaatactggaaaaatgtgacatctgt
gatgcgctgtccatgatgcggcggccgacgtgcggcagcaacccttcgccctgcttcccg
ggcgtggggtgccaggagactgcggagggagtgcgctgcggcgcttgcccgcgcggctac
gtgggtgacggccgcagctgcaagccgggcgtcacgtgcgagcagcgcccctgctaccca
ggtgtgcagtgctacgacacggtggagggcttccactgcgggccgtgtcccgcgggcatg
acgggcgacggccggcggtgcaagggcaggcggggctgcgactccagtccttgccacccg
ggcgtgcagtgcgtcagcatggacgagccgccgtactaccgctgcgggagctgcccgccc
ggctccagggggaacggctccgtgtgccaggacgtggacgagtgcgacctggccgagccg
tgcgacccgcgcgcgcgctgcaccaacctgtccccgggcttccgctgcgccccctgcccg
gcgggcttcacgggctcgtccggcatggagggcgtggggctggaggtggctcgccgcaac
aagcagcgctgccacgacatcgacgagtgcgcggacggccgcaacggcggctgcgtgccg
cgctccgcctgcatcaacacccagggttcgttccactgcgggcagtgccagagagggttc
gtgggcaaccagacggtcggctgccacaacagacccggcatgtgccccgacgggtcggtg
tgtgacccgaacgcagactgcgtgaggactggtccagagtgctgcataacctacaagtgc
aagtgcaagataggctgggccggtgacggcaagaactgcgggcccgaccgagacttggac
gggtggcccgatgaagacctcggatgctcggaccctaaatgcaggaaggacaactgtgtg
ggcatcccgaactccggccaagaggatgctgacagagacaacataggcgacatctgtgat
gacgatgctgacaacgatggcatccccaacaaaccagacaactgccctcttgtgccgaac
ccggaccagctggatacggaccgcgacggagcggatcaccagggcgacgcatgcgacaac
tgccccacgatacccaactccgaccagtccgacgtggacaaggacgggctgggagacgtc
tgcgacgccgacatggacgacgaccgggtggagaaccacgtggacaactgccccaagaag
tacaaccccgaccagctggacacggaccgcgacggcctgggcgacgtgtgcgacaactgc
ccgagggtgccaaacgctgaccagcaggacgtggacaacaacctgatcggcgatgcctgc
gacgacggcaacgaccgcgacaaggacgggatacaggactcgcgggacaactgccccacc
gtcgccaacagcaaccagctggacaccgacagggatggccggggcgacgagtgcgacccg
gacaaggacgacgacgggattcccaaccatcgggacaactgccccatcgtgccgaacccc
taccaggaggacagggacggcgacggaacaggtgacgcctgccaggacgactgggacaac
gaccgggtgcgcaatcacctggacaactgtcccaacaactccaagatcagttccactgac
ttcaggacgtaccagaccgtggtgctggaccccgaaggagactcccaaatagaccccaac
tgggtgatctacaacaaaggggcagagattgtccagaccatgaacagcgacccgggactg
gccgtcggctacgatcaatttggcggagtcgactttgaaggaaccttcttcgtggataca
gaaatggatgatgattatgctggtttcattttcagctaccagaacaacaagaagttctac
actgtgatgtggaagaagagcgcgcagacctactggcaggcgaccccgttccgagccgtc
gcagagccgggcatccagctgaagctggtggactccgggacgggaccgggccagatgctg
cgcaactccctctggcacaccggggacacggaggatcaggtgaagctgctgtggaaggac
ccccgcaacgtgggctggagggagcgcgtggcctaccgctggctgctgctccaccgcccc
aagatcggcctcatccggctgcgcatcttcgagggcgagcacatggtcgccgactctggc
aacgtgtacgactccaccttgaagggcggccggctgggcgtgttctgcttctcccaggag
atggtcatctggtccgacctcgtctaccggtgcaacgagaatgtccccaagcccatctac
ctagagctgccgctgaaacttcgcgagcaagtgtcagttgaggattccagctcgatagga
ctgtaa
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