Bacillus rossius redtenbacheri: 134533920
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Entry
134533920 CDS
T09888
Name
(RefSeq) cartilage oligomeric matrix protein
KO
K04659
thrombospondin 2/3/4/5
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror04145
Phagosome
bror04512
ECM-receptor interaction
bror04518
Integrin signaling
bror04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134533920
04518 Integrin signaling
134533920
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
134533920
09142 Cell motility
04820 Cytoskeleton in muscle cells
134533920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bror04131
]
134533920
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
bror04147
]
134533920
00536 Glycosaminoglycan binding proteins [BR:
bror00536
]
134533920
Membrane trafficking [BR:
bror04131
]
Endocytosis
Phagocytosis
Opsonins
134533920
Exosome [BR:
bror04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
134533920
Exosomal proteins of colorectal cancer cells
134533920
Exosomal proteins of bladder cancer cells
134533920
Glycosaminoglycan binding proteins [BR:
bror00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
134533920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_3
EGF_CA
COMP
cEGF
Motif
Other DBs
NCBI-GeneID:
134533920
NCBI-ProteinID:
XP_063227789
LinkDB
All DBs
Position
1:complement(31526996..31667355)
Genome browser
AA seq
1041 aa
AA seq
DB search
MKSAPCRLAWLLGPLMLVLLPSLAGAVSMDQEASKVLEDVIAGDNFVISLKHIKPRRRLR
GSVETMFAVDFPGSQQKFVLMLDRRTKRVIVETVEDGRTRSQHFTVDTLTEGSILKSLVV
AVDQEQPGAHVTLYVDCSSQGMVATPRSMRDMHAKMAHPRLQVFRERRYVLEVDGPGGLS
NVLNRNNCPSNIMQAIQPATNEIPIPRGDIPISGDCDTDALLMKTLTQLVTQVTELRNEA
QRQRAEIYHVRQILEKCDICDALSMMRRPTCGSNPSPCFPGVGCQETAEGVRCGACPRGY
VGDGRSCKPGVTCEQRPCYPGVQCYDTVEGFHCGPCPAGMTGDGRRCKGRRGCDSSPCHP
GVQCVSMDEPPYYRCGSCPPGSRGNGSVCQDVDECDLAEPCDPRARCTNLSPGFRCAPCP
AGFTGSSGMEGVGLEVARRNKQRCHDIDECADGRNGGCVPRSACINTQGSFHCGQCQRGF
VGNQTVGCHNRPGMCPDGSVCDPNADCVRTGPECCITYKCKCKIGWAGDGKNCGPDRDLD
GWPDEDLGCSDPKCRKDNCVGIPNSGQEDADRDNIGDICDDDADNDGIPNKPDNCPLVPN
PDQLDTDRDGADHQGDACDNCPTIPNSDQSDVDKDGLGDVCDADMDDDRVENHVDNCPKK
YNPDQLDTDRDGLGDVCDNCPRVPNADQQDVDNNLIGDACDDGNDRDKDGIQDSRDNCPT
VANSNQLDTDRDGRGDECDPDKDDDGIPNHRDNCPIVPNPYQEDRDGDGTGDACQDDWDN
DRVRNHLDNCPNNSKISSTDFRTYQTVVLDPEGDSQIDPNWVIYNKGAEIVQTMNSDPGL
AVGYDQFGGVDFEGTFFVDTEMDDDYAGFIFSYQNNKKFYTVMWKKSAQTYWQATPFRAV
AEPGIQLKLVDSGTGPGQMLRNSLWHTGDTEDQVKLLWKDPRNVGWRERVAYRWLLLHRP
KIGLIRLRIFEGEHMVADSGNVYDSTLKGGRLGVFCFSQEMVIWSDLVYRCNENVPKPIY
LELPLKLREQVSVEDSSSIGL
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccgcgccgtgccggctcgcctggctgctgggcccgctgatgctggtgctgctg
ccgagcctggcgggcgccgtgtccatggaccaagaggcgtccaaggtgctggaggacgtg
atcgccggcgacaacttcgtcatcagcctgaagcacatcaagccgcggcggcggctgcgc
ggcagcgtcgagaccatgttcgccgtcgacttccccggctcgcagcagaagttcgtgctc
atgctggaccgccgcaccaagcgagtgatcgtggagacggtggaggacgggcgcacgcgc
tcgcagcacttcacggtcgacacgctgaccgagggatcgatcctcaagtcgctggtggtg
gccgtcgaccaggagcagcccggagcgcacgtgacgctctacgtggactgcagctcgcag
ggcatggtggcgacgccgcgctccatgcgcgacatgcacgccaagatggcgcacccgcgc
ctgcaagtcttccgggagcgacgctacgtcctggaagtggacggtcctgggggactcagc
aacgtgctcaacaggaacaactgtccgtcgaacatcatgcaagccatccagcccgccacc
aacgagatacccattccaagaggagacattcctatatccggagactgtgatactgatgcg
ctcctaatgaagactctgactcagctggtgactcaggtgacagagctgcggaatgaagcg
cagagacagagggccgaaatataccatgttcgacaaatactggaaaaatgtgacatctgt
gatgcgctgtccatgatgcggcggccgacgtgcggcagcaacccttcgccctgcttcccg
ggcgtggggtgccaggagactgcggagggagtgcgctgcggcgcttgcccgcgcggctac
gtgggtgacggccgcagctgcaagccgggcgtcacgtgcgagcagcgcccctgctaccca
ggtgtgcagtgctacgacacggtggagggcttccactgcgggccgtgtcccgcgggcatg
acgggcgacggccggcggtgcaagggcaggcggggctgcgactccagtccttgccacccg
ggcgtgcagtgcgtcagcatggacgagccgccgtactaccgctgcgggagctgcccgccc
ggctccagggggaacggctccgtgtgccaggacgtggacgagtgcgacctggccgagccg
tgcgacccgcgcgcgcgctgcaccaacctgtccccgggcttccgctgcgccccctgcccg
gcgggcttcacgggctcgtccggcatggagggcgtggggctggaggtggctcgccgcaac
aagcagcgctgccacgacatcgacgagtgcgcggacggccgcaacggcggctgcgtgccg
cgctccgcctgcatcaacacccagggttcgttccactgcgggcagtgccagagagggttc
gtgggcaaccagacggtcggctgccacaacagacccggcatgtgccccgacgggtcggtg
tgtgacccgaacgcagactgcgtgaggactggtccagagtgctgcataacctacaagtgc
aagtgcaagataggctgggccggtgacggcaagaactgcgggcccgaccgagacttggac
gggtggcccgatgaagacctcggatgctcggaccctaaatgcaggaaggacaactgtgtg
ggcatcccgaactccggccaagaggatgctgacagagacaacataggcgacatctgtgat
gacgatgctgacaacgatggcatccccaacaaaccagacaactgccctcttgtgccgaac
ccggaccagctggatacggaccgcgacggagcggatcaccagggcgacgcatgcgacaac
tgccccacgatacccaactccgaccagtccgacgtggacaaggacgggctgggagacgtc
tgcgacgccgacatggacgacgaccgggtggagaaccacgtggacaactgccccaagaag
tacaaccccgaccagctggacacggaccgcgacggcctgggcgacgtgtgcgacaactgc
ccgagggtgccaaacgctgaccagcaggacgtggacaacaacctgatcggcgatgcctgc
gacgacggcaacgaccgcgacaaggacgggatacaggactcgcgggacaactgccccacc
gtcgccaacagcaaccagctggacaccgacagggatggccggggcgacgagtgcgacccg
gacaaggacgacgacgggattcccaaccatcgggacaactgccccatcgtgccgaacccc
taccaggaggacagggacggcgacggaacaggtgacgcctgccaggacgactgggacaac
gaccgggtgcgcaatcacctggacaactgtcccaacaactccaagatcagttccactgac
ttcaggacgtaccagaccgtggtgctggaccccgaaggagactcccaaatagaccccaac
tgggtgatctacaacaaaggggcagagattgtccagaccatgaacagcgacccgggactg
gccgtcggctacgatcaatttggcggagtcgactttgaaggaaccttcttcgtggataca
gaaatggatgatgattatgctggtttcattttcagctaccagaacaacaagaagttctac
actgtgatgtggaagaagagcgcgcagacctactggcaggcgaccccgttccgagccgtc
gcagagccgggcatccagctgaagctggtggactccgggacgggaccgggccagatgctg
cgcaactccctctggcacaccggggacacggaggatcaggtgaagctgctgtggaaggac
ccccgcaacgtgggctggagggagcgcgtggcctaccgctggctgctgctccaccgcccc
aagatcggcctcatccggctgcgcatcttcgagggcgagcacatggtcgccgactctggc
aacgtgtacgactccaccttgaagggcggccggctgggcgtgttctgcttctcccaggag
atggtcatctggtccgacctcgtctaccggtgcaacgagaatgtccccaagcccatctac
ctagagctgccgctgaaacttcgcgagcaagtgtcagttgaggattccagctcgatagga
ctgtaa
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integrated database retrieval system
