Bacillus rossius redtenbacheri: 134533935
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Entry
134533935 CDS
T09888
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134533935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bror03019
]
134533935
03012 Translation factors [BR:
bror03012
]
134533935
Enzymes [BR:
bror01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
134533935
Messenger RNA biogenesis [BR:
bror03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
134533935
Translation factors [BR:
bror03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
134533935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_N
HA2_C
nSTAND3
AAA_22
ATPase
Ku_PK_bind
AAA_14
Rad17
AAA_19
Sigma54_activat
T2SSE
NACHT
NPHP3_N
NB-ARC
ResIII
Zf-C2H2_ZNF451_2nd
AAA_16
Myosin_head
PhoH
AAA_34
Motif
Other DBs
NCBI-GeneID:
134533935
NCBI-ProteinID:
XP_063227823
LinkDB
All DBs
Position
7:complement(44831647..44865681)
Genome browser
AA seq
1040 aa
AA seq
DB search
MGDRRFRGERNGFRDRQRNNWNRRTDSDQPSTSGGSGYVPRTRDRGRGRGRGRGGGGGPP
PGLSGKEIGMWYRNRSIQKKEEKQSASLAVNLDARLQRQIQDVLSSIDSSYLRPSARLGV
EKGCRPQSVKRAATDDDDGVEIMECSSVTDVKQKYSAGGGGVGDGGESAASKYRHIAESK
FKNKFLQNITGSIESNLASSLSMCSELIRDVELDEWLMKEVLKKKESERYQKMLTLRKKL
PAFKNKNEILELIRKNQIILISGETGCGKTTQVAQFILDDYISRGQGSLCHVVCTQPRRI
SAISVAERVAQERDESCGSVSVGYQIRLEARLPRSKGSILYCTTGMLLQFMRSDPGLRTI
SHLILDEIHERDVISDFVITIMKDVLPKRPDLKLILMSATLNAEHFSKYYNNCPSINIAG
FTFPVHEYYLEDVLEMTNFRSFKAVADQEPQGWRKHLHHFKAKIKGMEDYKDFIEPYVRH
LKTQGKYSDHVLTSLRNPDSEQINVDLIEALIHHICRNKDDGAILVFLPGWTDIAKLNSL
LTECRRYSPDRYIIIPLHSLMPTTTQKSVFDKPPPGVRKIVLATNIAETSITIDDVVFVV
DCGKIKMKNFDKENNISTLNAEWVSLANARQRRGRAGRVQPGICYHLYSKAREMILADYP
LPEMLRTRLEEVILQLKILQLGRAKPFLERVMDPPDSGVIDLSLKLLHTLNALDEDENLT
PLGYHLANLPLDPQIGKMVLMGAIFSCIDPVFSIAAGLSFKDPFVVPLGSEARVNAVKFK
LSKGIVSDHLVVAEALRQWEIADRRGHGPSFCWDHFLSSSTMVMLRNMKQQFAKYMHDMN
FLTSDNVKDPNGNLNSDNIGLVKAIICSGLYPNVAIIRQVKRIRRTGKMRVVLCTPEDGK
VQLHPKSITEKMEEFDSPFLLYHMKLKSTAIFLHDASVVNPLPLLFFGESLRSQMEDGAE
VIAVSDAIRFRCPESTATLVKDVRDRLNGLLEHKVTHPGVVDWNVHCDEGKLLRAIIYLI
TYEDKQMRLKAEDGDDEFLD
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgggagaccgaagatttagaggtgaacgaaatggatttcgggatcggcagcgcaataac
tggaatcgacgaacagattccgaccagccctcgactagtggtgggagcggctatgttccc
aggactcgagacagaggccgcggaagaggaagaggaagagggggagggggcgggcctccg
ccaggcttgagtgggaaagagataggaatgtggtatcggaatagaagtattcagaaaaag
gaagagaaacaatctgctagtcttgcagtgaacttagatgccaggcttcagcgtcaaatc
caggacgttttaagctcgatcgactcttcgtatttgcgtccgtcagctcgtctcggtgta
gagaaaggctgcaggccacagtctgtaaagagagcagccaccgatgacgacgatggcgta
gagatcatggagtgcagtagtgtgacggacgtgaagcagaaatacagtgcgggtggtggt
ggggtaggagacggtggcgaatctgcagccagtaaatataggcatatcgctgagagcaag
ttcaaaaataagtttctgcagaacatcacaggcagcattgagtcaaatctggccagctct
ctttcaatgtgttccgagctcatcagagatgtggaactggatgaatggttaatgaaagag
gttttgaagaagaaagaaagtgagcgataccagaagatgctgactttacgcaaaaaactg
cctgctttcaaaaataagaatgaaatacttgaattgatccgcaagaaccaaattattctg
atttctggagaaacaggatgtggaaagacaacccaagtagcccagttcatcttggatgac
tacatatcgagaggccaaggatcgctttgccatgtagtgtgcacccagcctcggaggatc
agtgctatttctgtcgccgagcgagtggctcaagaaagagacgaatcttgtggcagtgtg
tctgttggttaccaaattcgcttggaagcgaggttgcctcgttccaagggctcaatcctg
tattgcactacaggaatgttgcttcagttcatgcgttctgatcctggcctgagaaccata
tctcatttgatactggacgagatacacgagcgagacgtcatctctgacttcgttattacc
attatgaaagatgtgctgccaaagaggcctgaccttaagttgatattgatgagtgccacg
ttgaatgcagaacatttttcaaagtattacaacaattgtcccagtatcaacattgctgga
tttacctttcctgttcatgaatattacctggaagatgtcctggaaatgaccaatttcaga
tctttcaaagctgtggcagaccaggaaccgcaaggctggcgtaaacatttgcatcatttc
aaagctaagataaagggaatggaagattacaaggatttcatcgagccatatgtcagacac
ctaaaaacacaaggaaagtattctgaccatgttttaacgtcgctgaggaatccagactcg
gagcagattaatgtggacctcatagaagctctgatccaccacatttgtcgaaataaggac
gacggtgcaattttggtattcttgccaggctggacggacatcgccaaactgaattcattg
ctaacagaatgccgtagatatagtccagatcggtacataataataccactccattccttg
atgcctacaaccacccagaagtctgtttttgataagccacctccaggtgtaaggaagata
gtgctggccacgaacatagcagaaacgtccatcacgattgacgatgttgtgtttgtcgtg
gactgtggtaaaatcaagatgaagaactttgacaaagaaaacaatatctcaactctgaac
gcggagtgggtgagcctggctaatgccaggcagaggcggggccgggctgggagggttcag
ccgggaatctgctaccacctgtactccaaggccagggagatgatcctggccgactacccg
ctcccggagatgctgcgcacgcgcttggaggaggtcattctgcaactgaagatcctccag
ctcggccgcgccaagccgttcctggagcgggtcatggatcctccggactctggcgtcatt
gacttgtcactcaagttgctgcacacattgaatgccttggacgaagatgagaacttgact
ccgctcggctatcatctcgccaatttaccgttggacccgcagatcggaaagatggttctc
atgggtgccattttcagctgcatcgatcccgtcttctcgattgcagctggcctgtcattc
aaagatccatttgttgtgcctcttggatctgaggccagagtgaacgcggtgaagttcaag
ctgtcaaagggcattgttagcgatcacttggtggtggcggaggccttgaggcagtgggag
atagctgatcgtcgaggccatggtccaagtttctgctgggatcacttcctctcctccagc
accatggttatgctgagaaacatgaaacagcagtttgctaagtacatgcatgatatgaac
ttcctcaccagtgacaacgtgaaggatcccaacgggaaccttaactctgacaacattggc
ctggtgaaggcaatcatatgctctggactttatcccaatgtggcaatcatcaggcaggtg
aagcgaattcgtcgcactgggaaaatgagagtggtgttgtgcacgccggaggacggcaag
gtgcagctgcaccccaagtccatcacggagaagatggaagagttcgacagccccttcctg
ctgtaccacatgaagctgaagagcaccgccatcttcctgcacgacgcgtcggtggtgaac
ccgttgccgctgctcttctttggcgagtccctccgcagccagatggaggatggcgctgaa
gtgattgccgtgagcgatgcgattcggttccgctgccctgagagcactgccacgcttgtg
aaggatgtcagggacagactgaatggcctactggagcacaaggtaactcatccaggagtt
gttgactggaatgttcattgcgatgaagggaagctgctaagggctataatatatctcatc
acatatgaagacaaacaaatgcgactaaaggcagaagatggagatgatgaatttttagac
tga
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