Bacillus rossius redtenbacheri: 134533937
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Entry
134533937 CDS
T09888
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
134533937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bror03019
]
134533937
03012 Translation factors [BR:
bror03012
]
134533937
Enzymes [BR:
bror01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
134533937
Messenger RNA biogenesis [BR:
bror03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
134533937
Translation factors [BR:
bror03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
134533937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
DEAD
HA2_C
HA2_N
nSTAND3
AAA_22
ATPase
NACHT
AAA_19
AAA_14
Rad17
NB-ARC
AAA_16
Sigma54_activat
NPHP3_N
AAA_7
T2SSE
AAA_23
Motif
Other DBs
NCBI-GeneID:
134533937
NCBI-ProteinID:
XP_063227826
LinkDB
All DBs
Position
7:44866745..44930263
Genome browser
AA seq
929 aa
AA seq
DB search
MYGRRHYSDRDTERYKDEPARVLPLKLSPTDLQDIRDALQLAKPSLENLKQLNSEFDTST
ASRAASHAAGRKREDAGDSEFRKKFLQTITGSIDTKIADSQFMAMLLSRDPSVDGILENE
LQDKQESPHFRQMLEFRKKLPIFKKETQILSMIDAHQVVLISGETGCGKTTQVAQFILDD
YILRGQGSLCHVVCTQPRRISAISVAERVAQERDDPCGSASVGYHIRLEANLPRPNGSIL
YCTTGMLLQFMRSDPGLRTISHLILDEIHERDVFCDFVLTILKDVIPKRPDLKIILMSAT
LNAEKFSEYFDNCPTIDIPGFTHPVKEFYLEDVLQMTGFRNFSEPYRGNKNALDEIALNK
KRNEFENYILPYVSGLKSQQKYSDHVIQSLGKYSSEELSINLIESLIRHICNNEGEGAIL
VFLPGWNEISNLEGLLTEEKGYTSDEYLIIPLHSMLPTVTQKAVFEKPPPGVRKIVLSTN
IAETSITINDVVYVIDCGKMKTKNFDAVNNVATLQSEWVSRANSRQRKGRAGRVQPGNCY
HLFSRGRERIMTDYPLPEMLRTRLDEVILQIKILQLGKVEPFLGKVMNPPDSKVIALSLK
LLQDLKALDEHENLTPLGFHLANLPLDPQIGKMIIMATIFSCIDPIFSIAASLSFKDPFV
GSIRSEKKVLAAKLSLLKGHVSDHLAVAEAMRVWEELEVNKKKKFCRDHFLSQSTLYMLR
DMKGQFAQYLREMDFLISSDYKAGSANINSEHLGLVKAIICAGLYPNIAIFRRVDHSRHT
GKTNVKLSTREDGLVALHPKSVAESMKAFVSPFMAYHLKMRSSQVLLHDVTVVYPTALLF
FCESIVCGANSVVVSDQICFSCSSSVAATLLKELRDQLDVILKHKITHPNITDWSERNFE
AKLLRYVINLIVEEDKRMTVFIPEDRQRF
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgtatggacgtagacattattcagatagagatacagagcggtacaaagatgaacctgca
cgtgtccttcctctgaagttgagccccacagacctgcaggacatcagggacgctctgcaa
ctggccaagccgtcgctggagaacctgaagcagttgaactctgagttcgacaccagcacc
gcgtcgcgcgccgcgtcgcacgccgctggcaggaagcgcgaagatgccggggacagcgag
ttccggaagaagttcctgcagaccatcacaggtagtattgatacaaagatagcagattca
cagtttatggctatgctgctgagcagggatccaagtgttgatggaattttggaaaatgaa
ctgcaggataaacaggagagtccacatttcaggcagatgctggagttccggaagaaactg
cccatcttcaaaaaagaaactcagatcctctccatgatagacgcacaccaagttgtcctc
atttctggagagactggatgtggaaagacaacccaagtagcccagttcatcttggatgac
tacattttgagaggccaaggatcgctttgccatgtggtgtgcacccagcctcggaggatc
agtgctatttctgtcgccgagcgagtggctcaagagagagacgatccttgtggcagtgct
tctgttggctaccacatccgcttggaagcgaatcttcctcgtccaaatggttcaatcctt
tactgcactacaggaatgttgcttcagttcatgcgttcagatcctggcttgcggaccata
tctcatttgatactggacgagatacacgagcgagatgtattctgcgatttcgtcctgacc
attcttaaagacgtcatacccaagagaccagatcttaagataattctaatgagtgccact
ttgaatgctgagaaattctcagaatattttgataactgccctaccattgacatcccagga
ttcacacaccctgtgaaagaattctacctggaggatgttttgcagatgacaggtttcaga
aatttcagtgaaccataccgtggaaataaaaatgctcttgatgaaatagctcttaacaag
aaaaggaatgagtttgaaaactatattttgccatatgtcagcggcttgaagtctcaacag
aaatattcagaccatgttattcagtcactgggaaagtattcatcagaagaactcagtatt
aatcttatagagtccctcattcgtcacatctgcaacaatgaaggtgaaggtgcaatcctg
gtgtttcttccaggatggaatgaaatttcaaatctggaaggtttgcttactgaagaaaag
ggatatacgtcagatgaatatttgataatcccacttcattccatgctacctacagtgacc
cagaaggctgtgtttgaaaaaccacctcctggtgtaaggaaaattgtactttccactaac
attgctgagacgtctatcaccattaacgatgtggtgtatgtaattgactgtggcaaaatg
aaaacgaagaactttgatgctgtcaacaacgtcgcgaccttgcaatcagagtgggtgagt
cgagcgaactctcggcagcgcaagggacgggctggcagggtgcagcctggcaactgctac
cacctgttttcgcgaggtcgggaaaggatcatgactgactatccgcttcccgagatgttg
cgcactcgcttggacgaagtcattctccaaattaaaatccttcagctcggcaaagttgag
cccttcctggggaaagttatgaaccctcctgattcgaaggtgatcgcgctctctcttaag
ttgctgcaagacttgaaagccctggatgagcacgagaacctgactcctctgggattccat
ctcgccaacttgccgctggacccgcagatcgggaagatgatcatcatggctaccatcttc
agctgcatcgatcccatattctctattgcagccagcctctcattcaaggacccattcgtt
ggatcgatacgttcagagaagaaggtgcttgctgcaaaactcagtttgctgaagggacat
gtcagtgaccacctggcagttgctgaagcaatgagggtctgggaagagttggaagtgaat
aagaagaagaaattctgcagggaccactttctctcacaaagcactttgtacatgcttaga
gatatgaaaggacagtttgcacagtacttgagagaaatggattttttgatcagtagtgat
tacaaggctggaagtgcaaacataaattcagaacatttgggtctcgtaaaggcaatcatt
tgtgctggcttgtacccaaatattgcaattttcaggagggtggaccacagccgacacacg
ggcaagaccaacgtgaagctgagcacgcgcgaggacgggctggtggctctgcaccccaag
tccgtggcggagagcatgaaggcgttcgtcagccccttcatggcgtaccacctgaagatg
cgcagctcccaggtgcttctgcacgacgtcaccgtggtctaccccacggccctcctgttc
ttctgcgagagcatcgtctgtggggccaactcggtcgtcgtcagcgaccagatctgcttc
agctgcagctccagcgttgccgccacccttctcaaggaactgagagatcaactggatgtt
atactgaaacacaagataacccatccaaacattacagattggagtgaacgtaactttgag
gccaagttgctaaggtatgtaataaacctgatagtggaagaagacaagcggatgacagtt
tttattccagaagataggcaaaggttttaa
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