Bacillus rossius redtenbacheri: 134534062
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Entry
134534062 CDS
T09888
Name
(RefSeq) nucleoporin NDC1
KO
K14315
nucleoporin NDC1
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134534062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bror03019
]
134534062
Messenger RNA biogenesis [BR:
bror03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134534062
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
134534062
NCBI-ProteinID:
XP_063228120
LinkDB
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Position
7:55289787..55292421
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AA seq
571 aa
AA seq
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MERCKTSASIFKKRVFYSSLSVSVLQLCFLFVLLCLTHFDPWNPLEWLTSALVKFVSLRI
WGCFAGIVCVTAVQCYSYSKNFVNESKFAVNRFAQLRTFFSLNYWLLLNLHMVVWGIMSW
MIMELFEKNLIDAEDKCLSENRVVLLASGVWFGGYFLIFDCRNVQKPTPRYLQFPVIHQL
KFLQVKMSLFPLFQRSVVDAVSLTLVFFAFYIWKGNTLREIVYEYGLANNEWCKDTSYSV
LSISTILLTWFFSSIYFYTVYIMKLLFRVFLTEHHKFPVTAPFSSGSLLTIHEALLSSNP
VIMQLGYLDLRVLAEKDLSRRSELFTLSHLGGHPHNWNAVVETALKMICEFTGRLRMAVS
DEPKLVASACKTELKENNTKLEVGSPYRYTLRSLVTSGSEPTTLNPINMTVLAPVPEDTL
LDIVARHVKGAFTQLLEKPVICYFFGDRMELNVHHVLSHAQPVMWAADGLSLLAASSIVT
DKYGVALKDLPALITALLDLKQVLDRLHKMSTFKKELRSYQEDVKMRLSLQALVKRSLYR
ITIAFQHHINELPLSSGVKGQLKPFILFKEG
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atggaacggtgtaaaacgtcggctagtatttttaagaaaagagttttctactcatcttta
agcgtgtctgttttacagttgtgttttttatttgtattgctatgtttaacacattttgat
ccgtggaatcctttagagtggttaacctccgctttggttaagtttgtctctcttaggatt
tggggctgtttcgccggaattgtctgcgttacagcggttcagtgttattcatactccaaa
aactttgttaatgaaagcaaatttgctgttaatcggtttgctcagttgagaacgtttttt
tcgcttaattattggctactgttaaatttgcatatggttgtgtggggaattatgagttgg
atgattatggaactctttgaaaaaaatttaattgatgcggaggacaaatgtttaagtgaa
aatcgtgttgttttgctggccagtggtgtttggtttggaggatattttcttatatttgac
tgcagaaatgttcagaagccaacccctaggtatcttcagtttcctgtcattcaccaactg
aagttcttacaagtgaaaatgtctctgttcccattatttcaacgatctgtggtggatgct
gtttctctaacattagttttttttgcgttctatatatggaaaggaaacacacttcgagaa
attgtgtatgaatatggccttgctaacaatgaatggtgtaaggatacatcgtacagtgtc
ttgtctattagcacaattctcttgacttggtttttttcaagcatttacttctacactgtt
tacataatgaaactactttttagggtttttttgacagaacaccataaattcccagtcact
gctccatttagcagtggttcgttgttaaccattcatgaagcattgttgtccagcaaccct
gtgatcatgcagctgggatatttggatctaagagtgttagctgaaaaagacctctccaga
cggagtgagttatttacactcagtcatttgggagggcatccccacaattggaatgcggtt
gtagaaacagccttgaagatgatctgtgaattcacaggcagattgaggatggctgtgagc
gatgaaccaaaattggttgcatctgcttgcaagactgaattgaaagaaaataataccaag
ttggaggtgggctcaccatatagatatactttgcgtagtttagtaaccagtggtagtgaa
cctactaccctaaaccccatcaacatgacagttctagctcctgtccctgaggatacatta
ttggatattgttgctcggcacgtcaagggagcattcactcaactgttggagaaaccagta
atttgttatttctttggagaccgcatggagttaaatgtacatcatgtgctgtcgcacgct
cagccagttatgtgggctgctgatggcctgtctttgctggcagcaagctcaatagtgacg
gataagtatggtgttgccttgaaggacttgccagcacttattactgctcttttggacctg
aagcaagtgctggacaggttacacaagatgagcacattcaagaaggagttgagaagttac
caagaagatgtgaagatgagactttcgctccaggctttggtgaaacgtagcctgtatagg
ataaccattgcatttcagcaccacattaatgaacttccattgtcaagtggtgtaaagggc
caattgaaacccttcatcctcttcaaggaaggttga
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