Bacillus rossius redtenbacheri: 134534238
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Entry
134534238 CDS
T09888
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03022
Basal transcription factors
bror03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
134534238
09124 Replication and repair
03420 Nucleotide excision repair
134534238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bror03021
]
134534238
03400 DNA repair and recombination proteins [BR:
bror03400
]
134534238
Transcription machinery [BR:
bror03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
134534238
DNA repair and recombination proteins [BR:
bror03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
134534238
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
134534238
NCBI-ProteinID:
XP_063228592
LinkDB
All DBs
Position
7:complement(65844985..65860713)
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AA seq
299 aa
AA seq
DB search
MSQEVETSLLVVVLDTNPGQRLLREKAHFLTQCLDSVIAFVNSHLMLKPANRAAVLACHM
TSTQFLYPEPGEAGVGASLRQQDGQYEMFTHVERTLRHGLQRLARGEAERLRSGASVVAP
GDSLLAGALAVALCYVHRLERELSSGCKMNSRVLVVTGSSDSASQYMNYMNVFFTAQKQS
VTMDVCSLDQELGLLQQGCDITGGLYLQVPQLQGLLQYLLWVFLPEPPIRRKLVLPPPVK
VDYRAACFCHRELIDIGFVCSVCLSIFCKFSPICTTCHTVFKSPGPLPMKMKKKKIKMN
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagaagtggagacgagcctgctggtggtggtgctggacaccaacccggggcag
cggctgctgcgagagaaggcccatttcctgacccagtgccttgactccgtgatcgcgttc
gtcaacagccacctgatgctgaagccggcgaaccgcgctgccgtgctggcgtgccacatg
acgtccacgcagttcctgtacccggaacccggagaggcgggggtgggcgcctcgctgcgg
cagcaggacggccagtacgagatgttcactcacgtggagcgcacgcttcggcacggactg
cagaggctggcgcgcggcgaggctgagaggctgcgctcgggggcgtccgtggtcgctccg
ggggactccctgctggccggcgccctggccgtggcgctctgctacgtgcacaggctggag
cgtgagttgagcagcggctgcaagatgaactctcgcgtgctggtggtcaccggcagcagc
gacagtgcatcccagtacatgaactacatgaatgtcttcttcaccgcgcagaagcagagc
gtgaccatggacgtgtgcagcctggaccaggagctggggctgctgcagcaaggctgcgac
atcaccggcggcctctacctgcaggtcccccagctgcagggcttgctgcagtacctgctg
tgggtgttcctgccggagcctccaatcaggaggaagctggtgctgcccccgcccgtgaag
gtcgactacagggccgcgtgtttctgccaccgagagctcattgacattggcttcgtctgc
tccgtgtgtctttccattttctgcaagttcagtccaatctgcaccacatgtcacaccgta
ttcaagtccccggggcctttgccgatgaaaatgaagaagaagaaaattaaaatgaactag
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