Bacillus rossius redtenbacheri: 134534765
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Entry
134534765 CDS
T09888
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG7-like
KO
K14409
protein SMG7
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134534765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bror03019
]
134534765
Messenger RNA biogenesis [BR:
bror03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
134534765
mRNA cycle factors
Common to processing body (P body) and stress granule
134534765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_8
TPR_2
zf-AD
TPR_12
Motif
Other DBs
NCBI-GeneID:
134534765
NCBI-ProteinID:
XP_063229375
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All DBs
Position
8:complement(38864030..38927446)
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AA seq
896 aa
AA seq
DB search
MIMGLKAAVQALKKAERLKERVQGSKDLLNDAEAWLCQKQLQGIYQQVLILDLEYALDRK
VEQELWNYGFKNYIGALQNLSKDKKNQKRAESQAMLSLCLEAASGFYLTLLQEICTAFDL
DLPFRRKGSVYGNGKVWRGSDHFSQPNKSSCYYICQHCLVHLGDIARYRNQSREAEAFYR
HAVQLSPQSGQPYNQLALLEASRGDRLSTVFHYVRSVTVRHLFPAAATNLSRTFNKSAEE
QLNVDSRSKLSVSEYISLFLKLHGLLHTGTELQQVEKYVRILTTMLTAHVATESLSSWKL
VQMLAINLYALQNASGSVPSDRVTVFSAEQLSADERQARSLVLDLLAGSLSTYLLPVYTL
KDDDALVEYFALPAVKLTLDWIMQEPQVLGEAAFTSRLQIWPSLCKLLNGLQAVVTDFDP
DKYTSVPLPEDRDLQAFIPLEKAFSHLRFNSRDWEISQVTLNNIRASRLLEFGSWLVAQE
NYRLLSKRIIDGRDVFEPLGGHQVPPTDLIRELEELSLIKLPSPAPSDAGSWGSAATGAS
TPDNLGPALFGPHSPPLVETPAEKRAGILKPQGSLEKAREKEQGEGVWGQSNGQRKGRQN
VAMQAIMRKSLQQGEPEHVPLPDKPNKVTFKTPSPSISPQACPPADETKVSIAWSQQNPS
RQSLAPTTAGYLRQRHDVPLPSFPSNFSVPPPPIQFRQPPPPAPVSSLFPPVRQPSFAPA
TPWRDEQWWAGQQRMPCEDQSAFGRDASGWAARQLGGLDPYGGQAVVFSPHSARLYQQPH
SHIDTAHLSVFSGQESEHQSSKPSLQGSSKLLPQEGTFSSLAGDTTSTYSLFSSPSWTIH
SYGGSDVTTGMIGVASKNALAIGQQSLWSGPGPSPLERLLEQQKQLREGPAPKGGT
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgataatgggattgaaagctgctgtacaagctctgaagaaagctgaaagactgaaagag
agagtgcagggttcgaaggacctcctgaatgatgctgaggcatggctgtgccagaaacaa
cttcagggtatttatcagcaagtgctaatccttgatttggagtacgcattagacaggaaa
gtagagcaagaactatggaactatggttttaagaactatattggagcactacaaaatttg
agcaaagataagaagaaccagaaacgagcagaatcccaggcaatgttgtctttgtgcctg
gaggcagccagtggtttctacttaactctcctgcaggagatatgcactgcatttgatctc
gacctgccatttcgcaggaagggctctgtgtatgggaacgggaaggtttggcggggctcg
gaccacttcagccagcccaataagagttcctgctactacatctgtcaacactgccttgtt
cacctgggggacatagcccgctaccgcaaccagagcagggaagcggaggctttctacagg
cacgcagttcagttgtcgccccagagtggccaaccctacaaccagctggcgctgctggag
gccagccggggggatcgcctgagcactgtgttccactacgtgcgcagtgtgactgtcaga
cacttgttccctgcggcagccaccaacctgtctcgcaccttcaacaagagtgccgaggag
cagctgaatgtggactcgcgctccaagctatctgtctccgagtatatttccttgtttctg
aaacttcacggactgctgcacacaggcacggaactgcagcaggtggaaaagtacgtcagg
attttgaccacaatgttgacagctcacgtagctactgagagcttgtcgtcttggaaactt
gtacagatgctggcaatcaacctgtacgctctgcagaacgcaagtgggagtgtgccgtcg
gacagggtaacggtgttcagcgcggagcagctctctgccgacgagcgacaggccaggtct
ttggtgctggacctcttggctggctctctcagcacctacctgcttcccgtgtacaccctg
aaagatgacgacgctctcgtagagtacttcgccttgccagcggtcaagctgaccctggac
tggatcatgcaagagccccaggtgttgggcgaggcagcattcacctcccgcctgcagatc
tggcccagcctctgcaagctgctcaacggcctgcaggctgtggtcaccgacttcgacccg
gacaagtatacatctgttcccctgccagaagatagggatctgcaggccttcataccactg
gagaaggcattctctcaccttaggttcaacagccgcgactgggagataagccaggtgacg
ctgaataatatccgtgccagcaggttgttggagtttggttcgtggctggttgcacaggag
aactaccgcctactcagcaagaggataattgatgggagggatgtgtttgaaccgcttgga
ggccaccaggtgccacccaccgacctgattcgtgagctggaagaactcagtctcatcaag
cttccctctcctgcaccgtcggacgccggtagttggggtagtgcagccactggggcgtcc
accccggacaacttggggcctgccttgtttgggccccacagcccacctctcgtggaaaca
cctgcagagaagcgtgctgggatattgaagccccaggggtcgctggagaaagctcgcgag
aaggagcagggggaaggggtgtggggccagagcaacggacagaggaagggccgtcagaac
gtggccatgcaggccatcatgaggaagtctctgcagcagggtgaacccgagcatgtcccc
ctgccagacaagcccaacaaggttactttcaagactccatctcccagcatttccccccaa
gcatgtccaccggctgacgagaccaaagtgtcgatagcgtggtctcagcagaatccctcg
aggcagtccctcgcgccgaccacggccggttacctccgccagcgacacgacgttcccttg
ccgtcattcccttcaaacttctccgtccctcctccgcccatacagttccgacagcctccg
ccgcccgcccccgtcagctctttgttcccgccggtccgccagccctccttcgcccccgcg
acgccctggcgggacgagcagtggtgggccgggcagcagaggatgccgtgcgaggaccag
agcgcgttcgggcgcgacgcgagcggctgggcggccaggcagctggggggcctggacccg
tacggcggccaggcggtggtgttctccccgcacagcgccaggctctaccagcaaccgcac
tcgcacatcgacaccgcgcacctgtccgtgttcagcggtcaggaatctgagcaccagagc
agtaaaccatctcttcagggaagcagcaaattgttgccgcaagaaggcacattttcttct
cttgcgggagacaccacgagcacttactccctgttcagttcgccttcgtggaccatccac
agctacggtggctcggacgtgaccacaggcatgatcggagtcgccagcaagaatgcactc
gccatcggccagcagtcgctgtggtccgggccgggcccgtcgcccctcgagaggctcctg
gagcagcagaagcagctgagggaggggcctgcccccaaaggcgggacttga
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