Bacillus rossius redtenbacheri: 134535006
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Entry
134535006 CDS
T09888
Name
(RefSeq) DNA excision repair protein ERCC-8-like
KO
K10570
DNA excision repair protein ERCC-8
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03420
Nucleotide excision repair
bror04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134535006
09124 Replication and repair
03420 Nucleotide excision repair
134535006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bror04121
]
134535006
03400 DNA repair and recombination proteins [BR:
bror03400
]
134535006
Ubiquitin system [BR:
bror04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
134535006
DNA repair and recombination proteins [BR:
bror03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
134535006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR55
EIF3I
WDR90_beta-prop_4th
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
WD_LRWD1
Beta-prop_SPT8
Beta-prop_TEP1_C
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_RSE1_2nd
IMPDH
Motif
Other DBs
NCBI-GeneID:
134535006
NCBI-ProteinID:
XP_063229887
LinkDB
All DBs
Position
8:complement(57730790..57732799)
Genome browser
AA seq
387 aa
AA seq
DB search
MDHKQRSYNILNVLEKVRAGVLDARAVITCESLSRSRNLKLSKLKDFENVLQSATNQMDV
DCAEGKYLLCGLGDGSICIYNLYNYTGSPQFTCNVECMVDKNNRHAHKFSTECVQWYPFD
TGMFLSSGMDKKLKVWDTNTLIPVESFSTEGKVYQHHMARNSLIAVASSANQISLIDIRK
GSSVHELRGHSSLVLTCRWSPTEEYLLASGSCDRKVLLWDVRSARSCLRCLDQHNGEGQS
NSQSTSTAHDGFVNGLCFSENGLYLLSYGTDDSLRLWDVCWGRNEMVSFGSVPNHSKKCV
QLDVRTVVGSGVAYVPSGSNVLLFNIESGRNVRTLHGHFSTVNGCRFHPFLQELYSCGND
RNILVWSAGDSQVNSEQDEDAWSGDEN
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atggatcataaacagcggtcgtacaacatactgaatgtattggaaaaagttagagcaggc
gtattggatgctcgtgctgtaattacttgtgaatctttgagtaggtcacgtaatctgaaa
ctcagtaagctgaaggattttgagaatgtacttcagtctgccacaaatcagatggatgta
gactgcgcggaaggaaaatacctactatgtggcctaggagatggtagcatttgcatctac
aatttgtacaattacactggctccccacagttcacatgcaatgttgaatgcatggtggac
aaaaataaccgccatgctcacaagtttagtaccgagtgtgtacaatggtatccatttgac
acaggaatgtttttatcaagtgggatggataaaaaacttaaagtgtgggacacaaacaca
ttgattccagtagaaagtttctccacagagggaaaagtttaccagcaccacatggcacgg
aactctctgattgcagtcgcaagctcggccaatcagatcagcctcatcgacatccggaaa
ggttcgtccgtccacgagttgcgcgggcactcgagcttggttctgacgtgccgatggtct
ccgacggaggagtacttgttagcctcggggagctgtgacaggaaagtgctattgtgggac
gttcgttctgccaggagttgcctcaggtgtctggaccagcacaacggcgaggggcagtcg
aacagccagtcgacgagcacggcacacgacggcttcgtcaacggcctgtgcttcagtgag
aacggactatacctcctcagctacggaacagacgacagtctacgactgtgggacgtatgc
tgggggcgaaacgagatggttagttttggtagtgttcccaaccattcaaagaagtgcgtg
cagctagacgtaagaactgttgttgggtctggggttgcgtacgtaccttcaggaagtaac
gtcctcctgtttaatatcgaaagtggtagaaatgtgcgaactctacatggacatttcagt
actgtgaatgggtgtagatttcatccgtttcttcaagaactgtatagttgtggtaatgac
aggaacattttggtttggtctgcaggtgactctcaggtgaattctgaacaagatgaagat
gcctggagtggagatgaaaactga
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