Bacillus rossius redtenbacheri: 134535133
Help
Entry
134535133 CDS
T09888
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9 isoform X1
KO
K18735
protein SMG9
Organism
bror
Bacillus rossius redtenbacheri
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bror03019
]
134535133
Messenger RNA biogenesis [BR:
bror03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
134535133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg8_Smg9
NB-ARC
MMR_HSR1
ABC_tran
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
134535133
NCBI-ProteinID:
XP_063230146
LinkDB
All DBs
Position
8:complement(66094734..66113512)
Genome browser
AA seq
491 aa
AA seq
DB search
MEDEVNKARQGIIREIEMSDLDRGRGETRPRKFYQDRREAGAGRRPPVIIARADRDRDKP
PERAVQPTIILRPREDAPRPAVLRKDAEPQTPMYQLVSKLSLGETANPLAAPPQMRGCVK
LLDESLQFCDSCLEYLVDQNDFIVVGVVGTQGVGKSSLMSWLAGDSPEALHAEDRDGGVF
PRQGPEQHESGQHCTVGVDVCVTPDRMVLLDMQPVLSPAVAERLAHAEAKKFSALEFTSA
ESSTELQSMQLAAFLLSVCHVVVLVQDWFLDPNVLRFLQCAEMLKPATPTTSQDEEIIEY
FPHVLFLHNRAQPSDFSPRQVQLMQNVYNRAFLRSRVQIQSGIGIASGSVMDCLNPGSCG
EPLNLFLLPEVTGQGGPLPRPARLRGAGAPAAQTDPGRGQAAAHAHRALGEELVPLRLQG
VGERKEELLLLGVQPAVAVTTLVWLRRGSREVTSSVDYIPSSSVNKYCISHHLDGIIFNG
VACVLHAHIIN
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggaagatgaagtaaacaaagcacggcaaggaataatacgggagatagaaatgtctgac
ctggacagaggccggggagagacgaggccaaggaagttctaccaggacaggcgcgaggcg
ggggcgggccggcggccccccgtcatcatagccagggcggacagggacagggacaagccc
ccggagcgcgcggtgcagcccaccatcatcctgcggccgcgagaggacgccccgcgcccc
gccgtgctgaggaaggatgcggagccccagacgcccatgtaccagctggtgtccaagctc
tcgctgggggaaactgccaacccgctggcggcgcccccgcagatgcgtggctgcgtcaag
ctgctggacgagtcgctgcagttctgcgacagctgcctggagtacctggtcgatcagaac
gacttcatcgtggtgggcgtcgtgggcacgcagggagtgggcaagtcctcgctcatgtcg
tggctggccggggactccccggaggccctccacgcagaggacagggacggaggggtgttc
ccgcgacagggcccggagcagcacgagagcgggcagcactgcacggtgggcgtggacgtg
tgcgtgacgcctgaccgcatggtgctcctggacatgcagcccgtgctgtcaccggcggtg
gcggagcggctcgcgcatgcggaggccaagaagttctccgcgctggagttcacgtcggcc
gagagcagcacggagctgcagtccatgcagctggcagccttcctgctgtctgtgtgccac
gtggtggtgctggtgcaggactggttcctggaccccaacgtgctcaggttcctgcagtgt
gcggagatgctgaagccggccacccccaccacgtcgcaggacgaggagatcatcgagtac
ttcccccacgtgctgttcctgcacaaccgggcccagccctcggacttcagtccgcgccag
gtgcagctcatgcagaacgtgtacaaccgcgcgttcctgcggtcccgggtgcagatccag
agtggcataggcatcgccagcggcagcgtgatggactgcctgaaccccggctcgtgcggc
gagcccctgaacctgttcctgctgccggaggtcaccggccagggcgggccacttccgagg
ccagcccggctgcgcggagctggtgcgccggctgcgcagacagatcctgggcgtgggcaa
gcagccgctcacgcacaccgtgctctcggagaagaactggttccactacgcctacaaggt
gtgggagagcgtaaggaagagctccttcttcttggagtacagccggctgttgccgtgacg
accctggtgtggctccggcgtggctccagagaagtcaccagcagtgtggattatataccc
tcgtcaagtgtgaataaatactgtatatctcaccatcttgatggaataattttcaatggc
gttgcttgtgtattgcatgcacacattattaattaa
DBGET
integrated database retrieval system
