Bacillus rossius redtenbacheri: 134535208
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Entry
134535208 CDS
T09888
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH isoform X1
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
bror
Bacillus rossius redtenbacheri
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bror04121
]
134535208
Enzymes [BR:
bror01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134535208
Ubiquitin system [BR:
bror04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134535208
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-2nd
SHPRH_helical-1st
Helicase_C
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
zf-RING_2
RING_XB3-XBAT31
zf-C3HC4_4
zf-rbx1
PHD
zf-Nse
KCNQ_channel
Motif
Other DBs
NCBI-GeneID:
134535208
NCBI-ProteinID:
XP_063230319
LinkDB
All DBs
Position
1:43118230..43216204
Genome browser
AA seq
1461 aa
AA seq
DB search
MVKRKQRTPKRVSELNEYVWEGRRLAVAEPEHQDVPENSGNNRKKRTKLGNSIAPVDYVL
QSKLSDCLFYLKIVGLGNEISSLFLGTVILNVEASSLPQCTEFWLYVSEEQRKSFLYFEV
DDKVHYYTVTQGLDIDFYSALSRKCFTLKFEEFDGEACHVRIRIYLPEPECLRLQQKKVP
ELQTVIGHFYQIAAPVFDDSRCMINHNVQELYDAVKQFYRDAGDPMNFNVEHEDLKPKLR
PYQVQAVSWMLSRESQSPKTEAQEEVHCLYAELRLPDGKLVYYNKCLGHILLQKPVSKPP
PTGGILADEMGLGKTVEILALILMNPRKDVPAIEHVKEDDDATVSCVDEISLPANNADDD
DAGLSEGPVPESIRVNADAAKEVAVPRVRKPTKCKVSRTRKKTKRKKATAKNGNVAEERE
ERKQKRKVSQLRQLLQQWYDEVLSGIDRRPVQPAKVSVHCLCGQESPQEARVRCSACATW
QHHKCVNYLMGRAERYLCPPCWQKKEPVVSGCSLIVTPNSICNQWVDEIRTHISNTDFKV
LVYRGVHGVGFIQPYQLMEYDVVIVTYETLRKELNFDANGSQHKKLRHEKRFVSPPSPLS
CVSWWRVCLDEAQMVEGACKAAEMVQRLPSTHRWAITGTPVQKTFQDLYGLLLFLGVDPY
CEHMCWQDLLYKPYCLNDRAPLLKVMCQFMWRTQKRDVLQQMGVPEMKEEIIFLHFSPIE
EFYYRCQHLSSSTEFRRKLLSTHLDTPFDSMDRQILAKILAPLVQLRQACVHPHAVRRGA
VHLIGNKDTMTMEEVLESMIKKTKTDCEEELRKYISSLNGMAGIGLINEKYPETVELYRQ
VLRTSEEHNFLKTDSLQKIHAMHNLAEVLALHAGSVPPTLRDDKLLEEVKDLETEYISKH
ETLLAASLRTVKDLGSSVGEVRAGLHGSLDWWWAAALERLAAAGATQELLGLVTLELDCP
PWLREKTPVATVSHHLQMWTQSVVKKRKIVLKDLKMLQAVPCLDLVNEALSCHLRVQYKN
KTRLCRSCKHESLLKSYESDLFAVSKNQARHALVGEVLVLGQLNQGSWKPNFMELVLRKV
LSCARLRGLDSQCIEDGNSCFRWLDLLKKEFKHLRVLWRQLHDKVSAVDELSMSKLRLRL
RMEDEPLTSSAKDPHNLRSVQPDSLAKIHVIDPYQLDMYETKLYNESELSLSELKKKTGQ
FVYLQNLRKENTLGSQPCPICKGELKDKWNVLECGHSFCLECVTTLLNQMSRNRTLVRCP
VCRELSDHRNISYVVIDDKCKQGETCEDELSVQGSYSTKVEAIVRRLLALKKQDPFVKAL
VFSTWDKVLDILESALVKNDITFTRIRTGIRNKDSVKHFKLAAGDSHITALLLPVHLGSK
GLNLTEATHVLLTEPILNPTDELQVLGRMHRIGQTRETTVHRFLIHNTIEERIHLAMQSG
VDQWTTGKVTLRKFQQLLVQS
NT seq
4386 nt
NT seq
+upstream
nt +downstream
nt
atggttaaacggaaacaacgtacccctaaacgcgtgtcagaacttaatgaatatgtttgg
gaaggccgacgcttggctgtagctgagccagagcaccaagatgtgcctgaaaacagtgga
aacaatcgtaagaaaaggactaaattgggaaacagtatagctccagtagattatgtatta
cagtcaaaattatctgattgtttattttatctcaaaattgttggacttggaaatgaaata
tcaagtctttttttgggaacagttattttaaatgtcgaggctagttctttaccacagtgt
acagaattttggctgtacgttagtgaagaacaaagaaaaagtttcttgtacttcgaagtt
gatgacaaggtacactactacacagtgacacagggtctggatatagacttttattcagct
ctttcccgtaaatgctttacattaaagttcgaagaatttgatggtgaggcttgccatgtg
agaatacgcatttatctgccagaacctgaatgcctgagactgcagcagaagaaagttccc
gagctgcaaaccgttattggtcatttttaccagattgcagcaccagttttcgatgacagt
aggtgtatgatcaaccacaatgttcaagaactgtatgatgcagttaaacagttttatcgt
gatgcgggtgatcctatgaatttcaatgtggaacacgaggatcttaagcccaaactacgt
ccatatcaagtacaagctgttagttggatgctgagtagagaatcacaatctccaaaaaca
gaggcacaagaagaggtacattgcctgtacgcggaactgaggctgccggatgggaagctc
gtgtactacaacaagtgcttgggccacattcttctgcagaagccagtcagcaagcctcct
cccacgggtggcatccttgcagacgaaatgggactgggtaaaacggtggaaattttggca
ttgattttgatgaaccccaggaaggatgttccggccatcgagcacgtgaaagaggacgac
gatgctaccgtctcgtgtgtcgacgaaatatctttgcctgccaacaatgcggacgacgac
gatgccggactgtcggaaggaccggtgccggaaagtatccgggtcaatgcagacgcggcg
aaggaagtagcagttccgagagtcaggaagcctaccaagtgcaaagtttccagaaccagg
aagaagacgaaacggaagaaagctacggcaaagaacgggaatgttgcggaggagcgggag
gagcggaagcagaagcggaaggtgagccagttgaggcagctgctgcagcagtggtacgac
gaggttctctctggcatcgaccgcagacccgtccagccggcgaaggtgtcggtccactgt
ctgtgcggacaggagagtccgcaggaggcacgggtgcgctgctcggcttgtgccacgtgg
cagcatcacaagtgcgtcaactacctcatggggagagcggagagatatttgtgccctccg
tgttggcagaagaaggaaccagttgtatctggctgtagcttgattgtaacacccaattct
atatgcaaccagtgggtcgatgagatacgtacacacatcagcaacactgattttaaagtt
ttagtgtacaggggtgtgcacggtgtgggctttattcaaccatatcaattgatggagtat
gatgtggtaatagtaacatatgagacattacgaaaggaattaaactttgatgccaatggt
tcacagcataaaaaacttcgccacgaaaaaaggtttgtctcgcctccgtcgcctctcagc
tgtgtgtcgtggtggcgcgtctgtctcgacgaagcgcagatggtggagggagcctgcaaa
gctgcagagatggtccagcgcctgccgtcgacccaccgctgggccattacggggacccct
gtccagaagacattccaagacttgtatggtctgctgcttttcctgggtgtggatccatac
tgcgagcatatgtgctggcaggacttgctgtacaagccatactgcctcaacgatagagct
cctcttttaaaggttatgtgccagtttatgtggcgtacacaaaagagagacgtgttgcag
cagatgggagtgcctgaaatgaaagaagaaataatatttctacacttttctcctatagaa
gaattctattatcgttgtcagcacttgtcatcttcaacggagttcaggcgtaaactattg
agcactcacttggacactccatttgattcaatggaccggcagatattagctaagatactg
gctccattggtccagctgcgacaggcttgtgttcatccacacgctgttcgtcggggggca
gtacatctcattggtaataaagacaccatgaccatggaagaggtattggaatccatgata
aaaaaaaccaaaacagactgtgaggaagagttacggaagtacatttcttctcttaatggc
atggctggcatcggtttgattaatgagaagtatccggagacagttgaactttaccggcag
gtgttgaggacctcggaggagcacaacttcttgaaaactgattcgctgcagaagatccat
gccatgcacaacctagccgaggtgttggcattgcatgcgggcagtgttccacccactttg
agggacgacaagttgttggaagaggtgaaagacttggagactgagtacataagcaaacac
gaaacactgctggcggccagcctgcggaccgtgaaggacctgggctcctcggtgggggag
gtgcgggccggcctgcacgggagcctggactggtggtgggcggcggcgctggagcgcctg
gcggccgccggagcaacccaggagctgctgggcctcgtcacactggagctggactgcccc
ccctggctccgagagaagacacctgtggcgacagtgtcgcaccatcttcagatgtggact
caatctgttgtgaaaaagcggaagatagttctgaaagacttgaagatgttgcaggcagta
ccatgtttagatttggtaaatgaagctttgagttgccatctccgcgtgcagtataaaaat
aagacaaggttgtgtcggtcgtgcaagcacgagtcgctgctgaagagctacgagagcgac
ttgttcgcggtgagcaagaaccaggcgaggcacgcgctggtgggggaagtgttggtgctg
ggacaactcaaccagggctcctggaagccaaacttcatggagttggtgctgaggaaagtg
ctttcttgcgctcgtctcagaggcttggacagccagtgcatcgaagatggcaactcgtgt
ttcagatggcttgatttgctgaaaaaagaatttaagcacctgcgagtgttgtggagacag
ctgcacgacaaggtgtctgcagttgatgaactcagtatgtccaagttgcgactgagactt
cgcatggaggacgaacccttgacgagctccgcaaaagacccacacaatctgcggtctgtg
cagcccgacagtttggccaaaattcacgtgattgatccgtaccagcttgatatgtatgag
actaagttgtacaacgaaagcgagctctccttgagtgagctgaagaagaaaactggtcag
tttgtttatttacaaaatcttcgcaaagagaatacactcggcagtcagccgtgtcccatc
tgcaagggtgaactgaaggacaagtggaatgttctggaatgcgggcacagcttctgcttg
gaatgtgtgaccacactgctcaaccagatgagcaggaacaggactttggtgaggtgccct
gtgtgtcgcgagttgtccgaccacaggaacatatcgtacgtcgtcatcgatgacaaatgc
aagcaaggagaaacgtgcgaagatgagctgtcagtgcaaggctcatattccaccaaagtc
gaggcgattgtccgcaggttgctggcgttgaagaaacaagatccttttgtcaaagcgttg
gtgttttctacgtgggacaaagtgttggacatccttgaatctgctttagtgaaaaacgat
atcaccttcactcgaatacgtactggaataaggaataaggattcagtgaaacattttaag
ctggctgcgggtgacagtcacatcactgcccttctcctcccggtacacctcggctccaag
ggtctcaacctcacagaagcaacacatgtcctgctgactgagcccattctgaacccaact
gacgagctgcaggttcttgggcgcatgcatcgtattggacagaccagggaaacaactgtg
catcgtttcttgatccacaacaccattgaagagcgcatccaccttgctatgcagtctggt
gtagaccaatggactactgggaaagttaccctgcgaaaattccaacaacttcttgttcaa
agttaa
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integrated database retrieval system
