KEGG   Bacillus rossius redtenbacheri: 134535556
Entry
134535556         CDS       T09888                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1 isoform X1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
bror  Bacillus rossius redtenbacheri
Brite
KEGG Orthology (KO) [BR:bror00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:bror03041]
    134535556
Spliceosome [BR:bror03041]
 Complex B
  Other components
   Complex B specific factors
    134535556
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 EIF3I WD40_Gbeta Beta-prop_EML ANAPC4_WD40 Beta-prop_VPS8 Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd NBCH_WD40 Beta-prop_RIG_2nd LisH_TPL WDR90_beta-prop_4th Beta-prop_ACSF4 Beta-prop_NOL10_N Beta-prop_NUP159_NUP214 Beta-prop_Aladin Beta-prop_Vps41 Beta-prop_TEP1_C Ge1_WD40 Beta-prop_HPS5 Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_Nup120_160 CFAP251_N Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_WDR35_TULP_N Beta-prop_SPT8 DSE1_N Beta-prop_WDR41 TRM82_WD Beta-prop_WDR19_1st ASA1 Beta-prop_EIPR1 Beta-prop_IP5PC_F Beta-prop_DCAF12 WD40_RFWD3 Beta-prop_SCAP Beta-prop_BBS7 Beta-prop_RSE1_2nd PAC11 DUF7165 LisH_UCP007778 PROPPIN LisH_PAC1 LisH_WDR26 WD_LRWD1 zf_topless WDR54 Dimer_MINDY4_N LisH_SSDP
Other DBs
NCBI-GeneID: 134535556
NCBI-ProteinID: XP_063230801
LinkDB
Position
8:18696510..18765639
AA seq 510 aa
MAIEIESADVIRLIQQYLKESNLMKTLQTLQEETGVSLNTVDSVEGFVSDINNGHWDTVL
KAIQSLKLPDKKLIDLYEQVVLELIELRELGAARSLLRQTDPMIMMKQQEPERYIHLENL
LARSYFDPREAYPDGSTKEKRRAAIAQALSGEVSVVPSSRLLALLGQSLKWQQHQGLLPP
GTTIDLFRGKAAIRDQEEEKYPTQLSKQIKFGQKSHVECARFSPDGQYLVTGSVDGFIEV
WNFTTGKIRKDLKYQAQDNFMMMEEAVLCLAFSRDSEMLASGSQDGKVKVWKLQAGQCLR
RFEKAHAKGVTCLQFSRDNSQVLSASFDTTIRIHGLKSGKTLKEFRGHGSFVNEVVFTAD
GHSILSASSDGSVKVWSIKSTECTNTFKSLGAGDTTVNSIHLLPKNPEHFVVCNRTNTVV
IMNMQGQIVRSFSSGKREGGDFVCAVLSPRGEWIYCVGEDLVLYCFSTSSGKLERTLNVH
EKDVIGVAHHPHQNLLCTYSEDGLLRLWKP
NT seq 1533 nt   +upstreamnt  +downstreamnt
atggccattgaaatagaatctgcagatgtgatacgtttgatacaacagtacttgaaagag
tcaaatctcatgaaaactctgcaaacattgcaggaagagacgggtgtgtcgctgaacacg
gtggacagcgtagaagggtttgtatctgacatcaacaatggacattgggacaccgtcttg
aaggcaatccagtctttgaaactcccagacaagaagctcatagacttgtacgagcaggtg
gtgttggagttgatcgaactacgggagctgggagctgcccgctcgttgctgcgacagaca
gatccgatgatcatgatgaagcaacaggagccagagcgatacatacatttagaaaacctg
ctggcacgctcgtacttcgacccccgcgaggcgtacccggacggcagcaccaaggagaag
cggcgtgcagccatcgcccaagccctgtcgggagaggtgtcggtggtgccgtcgtcccgc
ctgctggccctcctggggcagtccctgaagtggcagcagcaccagggactactgccgcca
ggaaccaccattgacttgttccgtggtaaggcagcaatcagggaccaggaggaggagaag
taccccacccagttgtcgaagcagatcaagtttggccagaagtcgcatgtggagtgcgct
cgcttctcgcccgacggccagtatctggtcaccggaagcgtggatggcttcattgaggtg
tggaacttcaccactggcaaaatacgcaaagatctgaagtaccaagcgcaggacaacttc
atgatgatggaagaggcggtgctgtgcctggcattcagccgcgactcggagatgctggcg
tcgggctcgcaggacggcaaggtgaaggtgtggaagctgcaggcgggccagtgcctgcgc
aggttcgagaaggcacacgccaagggggtcacgtgcctgcagttctcccgggacaacagc
caggtgctcagtgcctccttcgacaccaccatcagaatacatggtttgaagtctggaaag
acgttgaaggaattcagaggccacggttcatttgtgaacgaagtggttttcactgcagat
ggtcacagtatactcagcgcatcatctgacgggtcagtgaaggtgtggagcatcaagtcg
accgagtgcaccaacactttcaagtctctgggtgcgggagacactaccgtgaacagcatt
cacttgttgcccaagaacccagagcacttcgtcgtctgcaacaggaccaacactgtcgtc
atcatgaacatgcaaggccagattgtgcgatcattctcgtctggtaaacgggagggtggt
gactttgtgtgtgctgtgctgtctcccagaggggagtggatatactgcgtgggagaggac
cttgtcttgtactgcttctcaacctcctcgggaaagctggagcggacgttaaacgtgcac
gagaaagatgtaattggcgtagctcaccaccctcaccaaaacttgctgtgcacgtacagc
gaagatgggctgcttcgattgtggaagccgtga

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