Bacillus rossius redtenbacheri: 134535569
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Entry
134535569 CDS
T09888
Name
(RefSeq) regulator of nonsense transcripts 2-like
KO
K14327
regulator of nonsense transcripts 2
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03013
Nucleocytoplasmic transport
bror03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134535569
03015 mRNA surveillance pathway
134535569
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bror03019
]
134535569
Messenger RNA biogenesis [BR:
bror03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
134535569
mRNA cycle factors
P-body specific factors
134535569
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
134535569
NCBI-ProteinID:
XP_063230825
LinkDB
All DBs
Position
8
Genome browser
AA seq
1628 aa
AA seq
DB search
MVSTDMEPGSPTDRVVPERRAKSWRREHEERCSRRLQKKNGQASTTESYLPDEGVSGVDS
SSKCDASDGGQSGTESSECETNSVDESSANAECQDSQALLSEFSRSKLTANSTDVFSAIK
NICELECSKYDCLSKDIVSLAEDSDLEGKIVDVSELESTIIRDLGGSGGVECDQHSNHSS
VHEVVNHLAENDENDTSLPIEHQMVTDNDKLDFSLIKDLQENSVEGEELNADDSEVSATQ
VDELSVELEVSGKKSSNIFPEGFVGADAHLPAVVSSRDSLCEATSSTDSIQLIEKGTTDV
DTIKDICVMVGETYQISENGVGELNDSARKDSSSADLLEHSTEKFVEHQGKLEAVEVCRG
TVDAVVESASKLAGCGDTSAVDAGLEHGVVITSAGNVVSTSSGMGNAPERPDISCADLTL
QDSSPVTETSFDRRDVILITSESQPTLTDESDDIKYKNELEMYIAEANERLTTMAKLRQL
NQNVANLRPDDSYFSKLDSSLKKNTSFVRKLKMFAASQLEPLLRDMATLNLTKYVSEVAA
ALVEAKLKMSDVPHVVKLCGALHRDYADFAAHLLENWQKVMAIRKDDKSFNQSKLRVDLR
FYAELINAGIFTHKEGLPLLGNVLTVLINMDKEEHNNINIISTFCRYCGEDYAGLTSRKV
RQMAEKYNMTIPRSTLLSKDKQRNVRTLLKDYYTSLCKHLLKEHRELQAFERQNKKILQT
KGELSSERRERGNALQTSVQRLHAGTLTFSEVLDEDLPSLPQEDVVDIESLDLKVGNSES
EDGILSSNLWEDEDTQNFYEVLPNMKDFLPSLTIQSTDPEAQVSEEALEADLEEIEECLV
AKDEEEEPLPPDPEEVEEPESQANISNKIMLDSFLTNLPQCVNREMIDSAAVDFVMTLNT
KYNRKKLVKMLFSVQRTRLDLLPFYARLVAILHPVMPDVAAELGQFLKQDFKYHIRKKDQ
INIESKIKVVRFIGELVKFKMYSKIEALYCLKLLLHDFTHHHIEMCCNLLESCGRFLFRH
PDSHQRTKAYLEQMMRKKSVTALDSRYVTMIENAYYHVNPPELAPCVKKERPPMHEFIRK
ILYQDLTKPSTDKVLRLMRKLNWESDELAAYAVKCLTHAFNVKYYNIRCLANLVAGLVTY
QELVGTQVVDGVMEDIRLGMEINQVKYNQRRVAMVKYLGELYNYRMVESGDIFKVLYSLI
TFGVSMRHEVPSILDPPDHLFRIRLVCILLETCGQYFNNGISKRKLDYFLSFFQNYYWFK
FSSPHWTAECSFPIGMTHMFRDTIVNLRPNIHLYADYEEAQRGIEELKEEFASTVLQQLQ
DSGKPPAGGAELGTIVENAAELDDQKNEDDRKRGDDGEAAGKALVSSGEVEDNDTTQHSK
SLDVNGTGACGGAPKEDDEVKEEDEYRTVDGRYNFDEDEDGDDQDDNEESERTSEFDDMS
PATSQSQGDDVNLLGTLLHGPTCVECPEDDDFQNAFEQMVSSNIQERMHETIKPRQVDIS
VPLHVKNSTKKTYEQLHETKSEEKSMVNFVLMVRKGHKQQYKSLAVPVTSELALNLRDRE
EAERAEKERVKRLTLDINERLEEEDYQEMMQQLQRPAVVNLNRERRHKYQHPKGAPDADL
IFGSKRAR
NT seq
4887 nt
NT seq
+upstream
nt +downstream
nt
atggtttctacagatatggaaccaggaagtccaactgatagagttgttccagagcgtagg
gcaaaaagttggcgacgagaacacgaagaaaggtgcagcagacgactgcagaagaaaaat
ggccaggcttcaaccacggaaagctaccttccagatgaaggtgtttctggcgtggatagc
tcatccaagtgtgatgccagcgatggcggtcagagcgggacagagtcatcggagtgtgaa
accaactctgtcgacgagagttctgcgaatgcagagtgccaagacagtcaggccctgctg
tctgaattcagtcgcagcaagctgacagcaaacagcacagatgtttttagtgccatcaag
aacatctgtgagttagagtgcagtaagtacgattgtttgtcaaaggacatagtgtccttg
gcagaagattctgatttggaagggaaaatagtggatgtatcggagctggaatccacaata
attcgagatttgggcggcagtggtggggttgagtgcgatcagcacagtaatcacagcagt
gtacatgaggttgtcaaccaccttgctgaaaatgatgaaaatgatacctccctgccaata
gaacatcagatggtgacagataacgacaagcttgatttttctttgatcaaagatttacaa
gagaattctgtcgaaggtgaagagctaaatgcagatgatagtgaagtcagcgccactcaa
gtggatgaactgagcgtggaattggaagtatcaggaaagaaaagcagcaatattttcccc
gaaggctttgttggagctgatgctcacttacctgcagttgtttcctcacgtgattcactg
tgcgaagcaacgtccagtacagacagcatccagttaattgagaaaggcaccacagatgtt
gataccatcaaggatatctgtgttatggttggtgaaacttatcagatttctgaaaatggg
gtaggtgaattaaacgacagtgcacgaaaagattcctcatctgctgacttattagaacat
tccactgagaaatttgtagagcaccaaggaaaactagaagctgtagaagtttgcagaggc
acggtggatgccgtggtggaaagtgcgagtaagttggctgggtgcggtgacaccagtgct
gtagatgcagggctggaacatggcgtggttataacatctgctggaaatgtggtgagcact
agttctggcatgggtaatgccccggagagaccagacatttcctgtgctgatcttaccctg
caggattcgtcacctgtaaccgaaactagtttcgatcggagagatgttattttgattaca
tcagaaagtcaaccaactttgactgatgaaagtgatgacataaaatacaagaatgaattg
gaaatgtacattgctgaagcaaatgaacgcttgaccaccatggcgaagctgaggcagctt
aatcagaatgtggcaaatttaagaccagatgactcttatttttccaagttggattccagt
cttaagaagaatacatcgtttgtcagaaaacttaaaatgtttgcggccagccagctggag
ccgctgctgagggacatggcgaccttgaacctgacaaagtacgtgagcgaggtggcagcc
gctctagtggaggcgaagctcaagatgagcgacgtgccgcacgtggtgaagctgtgcggc
gcgctgcatcgggactacgcagacttcgctgcccacctgctggagaactggcagaaggtg
atggccatacggaaggatgacaagtcattcaaccagagtaaactacgggtggatctgcgg
ttttatgctgagctgattaatgcgggtatatttacccacaaggaaggactgccattgctg
gggaatgtgctgaccgtgctcatcaatatggacaaggaagaacataacaacataaacata
atctctacattctgccgctactgtggggaagactatgcaggtttgacatcaagaaaagtt
cgacagatggcagagaagtacaacatgaccattcctaggagtactttactatcaaaagac
aaacaacgtaatgtgagaactctgctcaaggactactacacatctctttgtaaacatctt
ttaaaggaacacagagagttgcaagccttcgagcgccagaacaagaaaatcctgcagaca
aagggggaactgagttcagagcggcgcgagagaggaaatgccctgcaaacgtccgtgcaa
agactgcacgccggaacattgaccttctcggaagtgcttgacgaggacttgccatcactt
ccacaagaagatgttgtggatattgaatctctcgatttaaaagttggaaacagtgaaagc
gaggatgggatattgtcttctaatttgtgggaagatgaggatacccagaatttttacgaa
gttttaccaaacatgaaagatttcttacctagtctgacaattcagtccactgatccggaa
gcacaggtgtctgaggaagcacttgaagctgatcttgaagagatagaagaatgtttagta
gcaaaggatgaggaagaggaaccattgccaccagatccagaagaagtggaggagccggag
tctcaggcaaacattagcaacaagataatgctggattccttcctgaccaacctcccgcag
tgcgtgaatcgggagatgattgacagtgctgccgtggacttcgtcatgaccctcaacaca
aagtacaacaggaagaaactggtcaaaatgttattcagtgtacaaagaacacgcctagat
ttgctgccgttttatgcaagactggtagccatcttacacccggtaatgccggatgttgct
gcagagttggggcagttcctgaaacaggatttcaaataccacatccgcaaaaaggaccag
attaacattgaatcaaaaataaaagttgtgcgttttattggagaactggtgaagttcaag
atgtactccaaaatagaagccctgtactgcctcaagttgctgcttcacgacttcacacac
catcacattgaaatgtgctgtaatctcctggagtcatgtggtaggttcctgtttcgtcac
ccggattctcatcagcgaactaaagcttacctggagcaaatgatgcgcaagaaatcagtg
acggccctagactcgcgctacgtcacgatgatcgagaacgcgtactaccatgtgaaccca
cctgagttggctccatgcgtgaagaaggagcggccgcccatgcacgagttcatccggaag
atcctgtaccaggacctgaccaagcctagtacggacaaagtgctgcggctgatgcgtaag
ctcaactgggagagtgatgagctggcggcctatgccgtcaagtgcctcacacacgctttc
aacgtcaagtactacaacattcgctgcctggccaaccttgtagcagggctggtgacttac
caggagttagtggggacccaagtggttgacggtgtcatggaagacattaggcttggcatg
gagataaaccaggtgaaatataaccagagaagagtggcgatggttaaatacctgggagag
ttgtataattatcgcatggtggagagcggtgacatattcaaggttctgtattcacttata
acgtttggagtatcaatgagacatgaggtaccttccattctggaccctcctgatcacctg
ttccgaatacgtctggtgtgcatattactggagacgtgtggccagtactttaataatggt
attagcaagaggaagctagattatttcctctcatttttccagaattattactggttcaag
ttctcgtcacctcattggacagcagagtgctcgtttccgatagggatgacgcacatgttc
cgcgacacgatcgttaacctgcgtccaaacatccacctgtacgctgactacgaggaggct
cagaggggtatcgaggagctgaaggaggagtttgccagcaccgtcctgcaacagctgcag
gactctggcaagcccccggctggtggcgcggagctggggaccatcgtggagaacgccgcg
gagctcgacgaccaaaaaaacgaggacgacagaaaacgaggcgacgatggagaggcggct
ggcaaagccctggtgagcagcggagaagtggaggacaacgacacgacccaacattctaaa
tctctggacgtaaatggtacaggtgcctgtggcggagcaccgaaagaagacgatgaggtg
aaagaggaagacgaatatcgaactgtagatggcaggtacaactttgatgaggatgaagat
ggtgatgatcaggatgacaatgaggaaagtgaaaggacatctgagtttgacgacatgtct
ccagctacaagccagagtcagggagacgatgtgaacctgctgggaaccttgcttcacggg
ccgacgtgtgtggagtgtccagaggatgacgacttccagaacgccttcgagcagatggtg
tcctccaacatccaggagcgcatgcacgagaccataaagccacggcaggtggacatctcc
gtcccgttgcacgtcaagaacagcaccaagaaaacatatgagcaactgcacgagacaaaa
tcggaggagaagtcaatggtgaattttgtgctaatggtgcgcaagggtcacaagcagcag
tacaagagccttgctgtgccagtcacctcggaactagctctgaacctcagggaccgagag
gaggctgaaagggcagagaaagagcgagtgaagagacttacgttggacataaatgaaagg
ctagaagaggaagattatcaggaaatgatgcagcagttgcagagacctgcagtggtgaat
cttaaccgtgaacgaagacacaaatatcagcatcccaaaggagcgccagatgctgatctt
atttttggctccaagagagcaagatga
DBGET
integrated database retrieval system
