Bacillus rossius redtenbacheri: 134535793
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Entry
134535793 CDS
T09888
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror04137
Mitophagy - animal
bror04140
Autophagy - animal
bror04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134535793
04137 Mitophagy - animal
134535793
04148 Efferocytosis
134535793
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bror03000
]
134535793
Transcription factors [BR:
bror03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
134535793
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
PAS
PAS_9
HIF-1a_CTAD
PAS_4
HLH
HIF-1
Motif
Other DBs
NCBI-GeneID:
134535793
NCBI-ProteinID:
XP_063231139
LinkDB
All DBs
Position
10:complement(13835339..14389770)
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AA seq
886 aa
AA seq
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MDTKTKPVKEKRRNSEKRKEKSRDAARCRRSRETEIFMDLARALPLPPSSLGQLDKASVM
RLAISYLKVRSLLHPVPDEKRPKEKAAVRIIPKFKCGGDQLFLRALEGFLLVVSAEGDMV
FLSENIHEYLGITQFDLMGHSIYEFSHPCDHDEIKDILSIKAPIPHILSRSFFLRMKCTL
TSKGRNVNLKSASYKVIHCTGHLLAAPQVKEESKSECKDEGDANNNNKKDSGSGGGCGGY
PQHCLVAIGEPIPHPSNIEIPLDKQTFLSKHSLDMKFTYADDKIGDFLGYCPEDLVGKSM
YDYHHAMDNVTVEKGFKCLFSKGQCETGCYRFLAKNGGYVWVLTQATLIYGSKGHKPNSV
VCVNFVISGLEHQGEVFSSSQLAGAAPAAARVFRPAPPLSVTAEVFSARDAPPRPPRPQA
VTSEVFAPCPLPQAATAKIFAPRTEDMNKGFLTFSDDEPGLTMLKDEPDDLTHLAPTAGD
ACIPLEATEFMSEMFDQIMFSDNYCPLLADDQDLASLSDSQSSSVSKGSNDPFFSYRDDT
SSSEPSPSGDFGSYLHSPSHSKSPGDSSVPSLCSPGNATEDTNIPAFTSFNMDASSDCEE
DLCTRAPYIPMGFDEDFPLLVSPELMWGALPESSGGKRSSGLGEDDPAFPAKPNLNSSLA
QLLQKDSPVPCASHGHTAAKCNDHGGGLVNPAEVLGQIFTKKTCVGHCAGASTAGAARER
LPERPAVGKGAAPPPDLAKIPPGTGPPDRSAKRPAARQDGGPAKRGRTKPRGGATWPPSP
AQRQSNSVLMNLLVSGCDVKNIEDVVRSLKAPPDRAEADAEERKASIRKNSFSLLEPDPA
MIPSLADLSQQDYEVNAPLSSSSSLLKGRDLLLALDASSCGMELAQ
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggatacaaaaacaaaaccagtgaaggagaaacggaggaactcggagaagcgcaaggag
aagtcgcgcgacgcggcgcgctgtcgccgcagcagggagacggagatcttcatggacctg
gcgcgcgccctgccgctgccgccctccagcctgggccagctggacaaggcgtccgtcatg
cgcctcgccatctcctacctcaaagtgcgcagcctgctgcacccggttcccgacgagaag
cggcccaaggagaaggccgcggtcaggatcatcccgaagttcaagtgcggcggcgaccag
ctcttcctgcgcgcgctggagggcttcctgctggtcgtgtcggccgagggcgacatggtg
ttcctctcggagaacatccacgagtacttggggatcacccagtttgacctgatgggacac
agcatatacgagttcagccacccgtgcgaccacgacgagatcaaagacatcctgtcgatc
aaggctcccatcccacacatcctgtcccgctcgttcttcctgcgcatgaagtgcaccctc
accagcaaggggaggaacgtcaacctcaagtccgcctcctacaaggtgatccactgcacg
ggccacctgcttgcagcgccccaagtgaaggaggagtccaagtcagagtgtaaagacgag
ggcgacgcaaacaacaacaacaagaaggacagtggcagcggcggtggctgtgggggctac
ccccagcactgcctggtggccatcggcgagcccataccgcacccttccaacatcgagata
cctctggacaagcagaccttcctcagcaagcacagcctggacatgaagttcacgtacgct
gatgacaaaattggcgatttcctcggctactgtccggaagacttggtgggcaagtcaatg
tacgactaccatcatgccatggacaacgttactgtggagaaaggtttcaaatgcctgttc
tccaagggccagtgcgagacgggctgctaccgcttcctggccaagaacggcggctacgtg
tgggtgctgacccaggccacgctcatctacggcagcaagggtcacaagcccaacagcgtg
gtctgcgtcaacttcgtcatcagcggcctcgagcaccagggggaggtgttctcgagcagc
cagctggcgggcgccgcccccgccgccgcccgcgtgttccgccccgcgccgccgctcagc
gtcaccgccgaggtgttcagcgcgcgcgatgcgcccccgcggcccccgcggccccaggcg
gtgacgagcgaggtgttcgccccctgccccctgccgcaggccgccaccgccaagatcttc
gcgccgcgcaccgaggacatgaacaagggcttcctcaccttctccgacgacgagccgggc
ctcaccatgttgaaagacgagccggatgacctcacccacctggcgcccaccgccggggat
gcctgcattcccctcgaagctaccgagttcatgtccgagatgttcgaccagatcatgttc
tccgacaactactgtcctctgctcgccgacgaccaggatctggcctcgctcagcgactcc
cagtccagcagcgtctccaagggcagcaacgacccgttcttctcgtaccgcgacgacacc
tcttcttccgagccgtctccgtccggagacttcggctcctacctccattccccctcccac
tcgaagagtcccggagacagcagcgtgccgtcgctctgcagtcctggcaacgcgacggag
gacaccaacatccccgcattcacgtccttcaacatggacgcctcgtcggactgcgaggag
gacctctgcacgcgggcgccgtacatccccatgggcttcgacgaggacttcccgctgctg
gtgtcccccgagctgatgtggggcgcgctgcccgagagcagcggcggcaagaggagcagc
ggtctgggcgaggacgaccccgcgttccctgccaagcctaacctgaactcgagtctcgcg
cagttgctgcagaaggactctcctgtgccgtgcgcgtcgcacggccacacggctgccaag
tgcaacgaccacggcggaggactcgtgaaccccgcagaggtcctcggtcagatcttcacg
aagaaaacgtgtgtggggcactgtgcaggagcgagcacggccggggcagcgcgggaacgg
ctcccggagcggccggcggtcgggaagggagcggcccccccgccagacctcgccaagatc
cccccgggcacgggcccgcccgaccgctcggccaagcgccccgccgctcgccaggacggg
ggtcccgccaagcgcgggcgcaccaagccccgggggggcgcgacctggccccccagcccc
gcgcagcgccagagcaacagcgtgctgatgaacctgctcgtcagtggctgcgacgtgaag
aacatagaggacgtggtgcggtccctgaaggcgcccccggaccgcgcagaggcggacgcg
gaggagcgcaaggccagcatacgcaagaactcgttctcgctgctggagccggacccggcc
atgatcccctcgctggcggacctcagccagcaggactacgaggtgaacgcccccctgtcg
agcagcagcagcctgctgaagggacgtgacctgctgctggccctggacgcctccagctgc
ggcatggagctggcccagtag
DBGET
integrated database retrieval system
