Bacillus rossius redtenbacheri: 134536715
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Entry
134536715 CDS
T09888
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
bror
Bacillus rossius redtenbacheri
Pathway
bror03013
Nucleocytoplasmic transport
bror03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bror00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134536715
09122 Translation
03013 Nucleocytoplasmic transport
134536715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bror03019
]
134536715
03041 Spliceosome [BR:
bror03041
]
134536715
Messenger RNA biogenesis [BR:
bror03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
134536715
Spliceosome [BR:
bror03041
]
Complex C
Other components
EJC/TREX
134536715
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
134536715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
134536715
NCBI-ProteinID:
XP_063232661
LinkDB
All DBs
Position
11:complement(26672532..26861317)
Genome browser
AA seq
1597 aa
AA seq
DB search
MMAEIVNAEMWRNWDRQGKSDLLKICKQALKEGTTSVGLNSVLSRVIYELIWHGIKGPLR
RDVTIAALGDLAVLHSEMPSLILDIFSVIDAETSSSEGHSDDRSRFCFIAKECEKFLSEK
LLKERLEIDTLQDCGTLKNKGFYTKFIKVKTKLYYKQRKFNLFREESEGYAKLITELNQE
ISDNVTVQNILEIIKSLIGCFNLDPNRVLDIILESFEYRLDQHQFFIPLLQSYMPDPKIL
CEVLGFKFCFYQSSADETTPASLFSVTALMLQHDIIALDDIYGWLTPDDKVIIKEWEKEV
KEAKDYVRKMNVISTKDKEKDEAGEEKEGVKENLVQNQKLGLCEALLRVGDWRHTEQMAR
KLPEHCVLSQPPVARALCRLLHSILEPVYRRTCTLAPELRGTPAPPLNSSLAPPQANTFE
DVKEHAMPMLVTLGSSMHHDPILMHKVLRLGRAALTQKGGADGQPVRPADSCLYYEVLTL
LDEVILPSLSFMDCNCCVAEEVWNLLKLYPYQQRYCLYSRWKNDTCQSNAKLMRKRADAL
KKIKSLMKRVSKENIKPVGRLLGKLTHSSPGCVFDYMLLQIQIYDNLINPVVDSLKYLTS
LSYDVLGYCLVESLASADRERVKHDGTSISLWLQSLAAFCGAIFKKYNVELTGLLQYVAN
QLKAQRSLDLLILKEIVQKMAGIEAAEEMTAEQLEALAGGELLKGEAGYFSQVRNTKKPS
QRLKETLGEHDLAVALCLLMAQQRYCTVYKETDQSHLKLVGKLYDQCQDTLVQFGTFLMS
AMSMEEYVSKFPSIQKILSEYHIHPDVAFFLARPAFTHAINARYEILRKADPGSKKLSLT
AKHQKYWEAAREVMDPVVGLVRPLHPAKVWEDISPQFFVTFWSLTMYDLFVPVDSYAREV
NKLKALSLQAMESKDMAGSKGKKEQEKHTLLMEKLQEERKKQQEHVERVLARLKQEKDSW
FLSRSAKAAKNETITQFLQLCIFPRCTFTAADAIYCAKFVLTIHSLKTANFSTLLCYDRL
FCDITYSVTSCTENEANRYGRFLCAMLETVMRWHAEKATFEKECANYPGFVTKFRVCNHF
SEANDHVGYENYRHVCHKWHYKITKAMVMCLDSKDYVQIRNALIILIKILPHFPVLSKLS
QIIERKIEKVKEEEKNQRQDLYILATSYIGQLKSKATAMIKENDFHQVSEKPSKSETASI
ASKQDVNMAVLQQLPVKQVNGDIKPGAEKERAAEKGSSEKKDATLREAKEPRSEKRSAAR
QNDTLPPKMAAVGAAALPETKRDNTPGRAGSSPTRPGKDKADREKTKDKDYEAKEKASKK
EDGGEREKRSKDRKEEKAAAREERLAAREERLAAREERERAAVRESSQREERSSQREERS
SQRDDRSYREERYLELPVPALKDETRYSSYYGSAERERERGHYYREERDLSSLSNSSSGS
VHVRPQEPPEPDRDVKRRKLDGATSSKSAKVEERKEQPAGGPSDKPEKKERSSKGKEKGQ
RDKGVTDEEKELRRERKLGRKRDRTEEALFAAEQKRRKEEEKAALKMSHQNGEPVDAHIA
REKHHYREKSPYLRERERSHDREGRDKHRRSSEGKRR
NT seq
4794 nt
NT seq
+upstream
nt +downstream
nt
atgatggcggaaatagtgaatgctgaaatgtggagaaattgggatagacaaggcaaatca
gacttactcaagatatgcaagcaggcactgaaggagggtaccacctccgtcgggctcaat
tctgtgctgtcgcgggtgatctacgagctcatctggcacggcatcaagggcccgctgcgg
agggacgtgaccatcgccgcgctgggagacctggctgttcttcacagcgaaatgccatcg
ctgatattagacattttcagcgtgattgacgcagaaacatcgagttcagaggggcactcg
gatgatcggtccaggttttgtttcatcgccaaggaatgtgaaaagtttttgtcggaaaag
ctgcttaaagaacgactagagattgacactctgcaggactgtggaacattgaagaataaa
ggcttttacaccaagttcatcaaagtgaagactaaactttactacaagcaacggaagttc
aacctgtttcgcgaggagagtgaaggttatgccaagttaattactgagcttaaccaagaa
atatcagacaatgtcacagtccagaacattttggaaatcatcaagtcactgattgggtgc
ttcaacctggatcccaaccgggtgctggacataatcctggagtctttcgagtaccgcctg
gaccagcaccagttcttcatcccgctgctgcagtcgtacatgcccgaccccaagatcctg
tgcgaggtgctgggcttcaagttctgcttctaccagagctctgctgacgagaccacgccc
gcctcactcttctccgtcaccgcgctcatgctgcagcacgacatcatcgccctcgatgac
atctacggctggcttacaccggatgacaaagtcattatcaaagagtgggagaaggaggtg
aaggaagcaaaagactacgtgaggaagatgaatgtgatctcgaccaaggacaaggagaag
gacgaggcgggggaagagaaggagggtgtaaaggaaaatctggtgcagaaccagaagctg
ggtctgtgcgaggcgctgctgcgggtgggggactggcgccacacggagcagatggccagg
aagctgccggagcactgcgtgctgtcgcagccgcccgtggctcgcgccctctgccgactg
ctgcactccatcctcgagcccgtctatcgcaggacgtgcacgctggcaccagagctaagg
ggcacgcctgctccacccctgaactcttcgctagcacctccccaggccaatacctttgag
gatgtcaaggagcatgccatgcccatgttggtgaccctgggatcgtccatgcaccacgac
cctatcctcatgcacaaagtgctgcgccttggtcgtgccgcactcactcagaagggcggg
gcggacgggcagccggtgcggccggcggacagctgcctgtactacgaggtgttgacgttg
ctggacgaggtgatcctgccctcgctgtccttcatggactgcaactgctgtgtggcggag
gaggtgtggaacctgctcaagctctacccgtaccagcagaggtactgcctgtacagccgg
tggaagaacgacacgtgccagagcaatgcaaagctgatgcgcaagcgcgcagacgctctc
aagaagataaaatcgctgatgaagcgcgtgagcaaggaaaacatcaagccggtcggccgg
ctgctcgggaaactgacccactcctcgccaggctgtgtcttcgactacatgctcctgcag
atccagatctacgacaacctgatcaacccggtggtggactcgctcaagtacctgaccagc
ctgtcgtacgacgtgctgggctactgcttggtcgagtccctggcgtcggccgaccgcgag
cgcgtcaagcacgacggcacgtccatctccctgtggctgcagagcctggccgccttctgc
ggcgccatcttcaagaagtacaacgtggagctgacgggccttctgcagtatgtcgccaac
cagctcaaggcccagaggagcctggacctgctgatcctgaaggagatcgtgcagaagatg
gcgggaatcgaggccgcggaggagatgacggcggagcagctggaggccctggcagggggc
gagctactcaagggcgaggcggggtacttcagccaggtgcgcaacacgaagaagccgtcc
cagcggctgaaggagacgctgggggagcacgacctggcggtggcgctgtgcctgctcatg
gcccagcagcggtactgcaccgtctacaaggagacggaccagagccacctcaagctggtc
ggcaagctctacgaccagtgccaagacacgttggtgcagtttggaacgttcctgatgtct
gcaatgtctatggaggaatacgtctccaagttcccgtccatacagaagatactgtccgag
taccacattcacccagatgtggccttcttcctggctcggcccgccttcacgcatgccatc
aatgcgcgctacgagatcctgcgcaaggcggaccccggcagcaagaagctgtccctgacg
gccaagcaccagaagtactgggaggcggcccgggaggtgatggacccggtggtgggtctg
gtgcggccgctgcaccccgccaaggtgtgggaggacatctcgccccagttcttcgtcacc
ttctggtcgctcaccatgtacgacctgttcgtgccggtcgacagctacgcccgcgaggtc
aacaagctcaaggcactctctctgcaggccatggagtccaaggacatggcaggcagcaaa
ggcaagaaggagcaggagaagcacaccctgctgatggagaagctgcaggaggagcggaag
aagcagcaggagcacgtggagcgcgtgctggctcgcctcaagcaggagaaggattcgtgg
ttcctgtcgcgctcggccaaggcagcgaagaacgaaaccatcacgcagttcctgcagctc
tgcatcttcccacgctgcaccttcaccgctgctgatgccatttactgcgcaaagtttgtg
cttaccatccacagcctcaagacggccaacttctccaccctcctctgctacgatcggttg
ttctgcgacatcacctactcagttacgtcgtgcacggagaatgaagcgaaccgctacggc
aggttcctgtgcgcaatgctggagacggtgatgcgttggcacgcggagaaggccacattt
gagaaggagtgcgccaactacccgggctttgtgaccaagttccgggtgtgcaaccacttc
tccgaggccaacgaccacgtgggctacgagaactaccgccacgtgtgccacaagtggcac
tacaagatcaccaaggccatggtgatgtgcctcgactccaaggactacgtgcagatccgc
aatgccctcatcatcctgatcaagatcctgccccacttcccggtgctcagcaagctcagc
cagatcattgagcgcaagattgagaaggtgaaggaggaggagaagaaccagcgccaggac
ctgtacatcctggccaccagctacatcggccagctcaagagcaaggccaccgccatgatc
aaggagaatgacttccaccaagtcagcgagaagccctccaagtctgaaacagcctccatt
gcttcgaagcaggacgtgaacatggctgtcttgcaacagttgccagtgaagcaagtgaat
ggtgacattaagccaggagcagaaaaggagcgagcggcagaaaaggggtccagcgagaag
aaggacgcgacgctgcgtgaggccaaggagccgaggagtgagaagaggagcgctgcgcga
cagaacgacacgctgcctcccaagatggctgccgttggagctgctgcgctcccagagacc
aagcgagacaacactccagggcgggccggctcgtccccgacacggcccggcaaggacaag
gcggaccgagagaagaccaaggacaaggactacgaggcgaaggagaaggcgtcgaagaag
gaggacggaggggagcgggagaagcgctccaaggacaggaaggaggagaaggccgcggcg
agggaggagcggctggcggcgagggaggagcgactggcggcgagggaggagcgtgagcga
gccgcggtgcgagagtcgtcacagcgggaggagcggtcgtcgcagcgggaggagcggtca
tcgcagcgggacgacaggagctaccgggaggagcgctacctggagctgccggtgccggcg
ctgaaggacgagacccgctacagcagctactacggcagcgcggagcgggagcgcgagcgc
ggccactactaccgggaggagcgcgacctcagcagcctgtccaacagcagctcaggctcg
gtccacgtccggccccaggagccgcccgagccagacagagatgtcaagcgacggaagctg
gacggtgcaacttcctcgaagagcgccaaggtagaggagcgcaaggagcagccggcgggc
gggcccagcgacaagccggagaagaaggagcgctcgtccaagggcaaggagaagggtcag
cgcgacaagggcgtcacggacgaagagaaggagctacggagagagcgcaagttgggcagg
aagagggacaggacggaagaagcgttgttcgcggccgaacagaagcgacgtaaagaagaa
gagaaagcggctctcaagatgagccaccagaacggagagccggttgatgcccacatagcc
cgggagaagcaccactatcgggagaagtccccgtacctgcgtgagagagagcgctcgcac
gaccgcgagggacgagacaagcatcgacgctccagcgaggggaagcgcaggtga
DBGET
integrated database retrieval system
